Assay Details
Target Gene Details
Entrez Gene ID: | 9328 |
Gene Name: | general transcription factor IIIC subunit 5 |
Gene Aliases: |
TFIIIC63, TFIIICepsilon, TFiiiC2-63 |
Location: |
Chr.9:133030675-133058503 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
GTF3C5 | NM_001122823.1 | NP_001116295.1 | ||
NM_001286709.1 | NP_001273638.1 | |||
NM_012087.3 | NP_036219.2 | |||
XM_005272234.3 | XP_005272291.1 | |||
XM_011519201.1 | XP_011517503.1 | |||
XM_017015315.1 | XP_016870804.1 | |||
XM_017015316.1 | XP_016870805.1 | |||
AF133124.1 | AAD41476.1 | |||
AJ420443.1 | ||||
AK000194.1 | BAA91001.1 | |||
AK055092.1 | ||||
AK097295.1 | BAC04993.1 | |||
AK225761.1 | ||||
AK293980.1 | ||||
AK311481.1 | ||||
AY007123.1 | AAG01991.1 | |||
BC011355.1 | AAH11355.1 | |||
BC017337.2 | AAH17337.1 | |||
BC030157.2 | AAH30157.2 | |||
BQ673969.1 | ||||
DB194811.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2739138 | Chr.9:132727483 - 135521553 on Build GRCh38 | Deletion | TSC1 MIR548AW TMEM8C PPP1R26-AS1 RXRA LOC101928525 SLC2A6 DBH LOC100130548 SNORD24 ABO GFI1B SNORD141A C9orf116 MIR3689D1 MED22 CEL LINC00094 COL5A1-AS1 RNU6ATAC AK8 MIR4669 COL5A1 MIR3689B SNORD36A RPL7A FAM163B ADAMTS13 DBH-AS1 CACFD1 OLFM1 SNORD36B SNORD36C SURF2 FCN2 LOC401557 WDR5 C9orf62 MIR3689E SURF4 REXO4 ADAMTSL2 SPACA9 SURF1 FCN1 PPP1R26 OBP2B RALGDS GBGT1 CELP GTF3C5 LOC101928193 SARDH LOC101448202 MRPS2 MIR3689A STKLD1 BRD3 VAV2 MIR3689D2 MIR3689C SURF6 MIR6877 MIR3689F LOC100996574 LCN1 LOC105376306 |
nsv615596 | Chr.9:133030314 - 133080285 on Build GRCh38 | Loss | GTF3C5 LOC100996574 CEL MIR6877 LOC105376306 |
nsv831744 | Chr.9:132980050 - 133174043 on Build GRCh38 | Gain+Loss | GFI1B CELP GTF3C5 SNORD141A LOC100996574 CEL RALGDS GBGT1 MIR6877 LOC105376306 |
nsv508564 | Chr.9:133013830 - 133073076 on Build GRCh38 | Deletion | GTF3C5 SNORD141A LOC100996574 CEL MIR6877 LOC105376306 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |