Assay Details
Target Gene Details
Entrez Gene ID: | 9328 |
Gene Name: | general transcription factor IIIC subunit 5 |
Gene Aliases: |
TFIIIC63, TFIIICepsilon, TFiiiC2-63 |
Location: |
Chr.9:133030675-133058503 on Build GRCh38 |
Assay Gene Location: | Within Intron 3 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
GTF3C5 | NM_001122823.1 | NP_001116295.1 | ||
NM_001286709.1 | NP_001273638.1 | |||
NM_012087.3 | NP_036219.2 | |||
XM_005272234.3 | XP_005272291.1 | |||
XM_011519201.1 | XP_011517503.1 | |||
XM_017015315.1 | XP_016870804.1 | |||
XM_017015316.1 | XP_016870805.1 | |||
AF133124.1 | AAD41476.1 | |||
AJ420443.1 | ||||
AK000194.1 | BAA91001.1 | |||
AK024510.1 | ||||
AK055092.1 | ||||
AK097295.1 | BAC04993.1 | |||
AK225761.1 | ||||
AK293980.1 | ||||
AK311481.1 | ||||
AY007123.1 | AAG01991.1 | |||
BC009741.2 | AAH09741.2 | |||
BC011355.1 | AAH11355.1 | |||
BC017337.2 | AAH17337.1 | |||
BC030157.2 | AAH30157.2 | |||
BQ673969.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2739138 | Chr.9:132727483 - 135521553 on Build GRCh38 | Deletion | MIR3689F OBP2B CACFD1 SURF6 FCN1 SARDH MIR3689A DBH-AS1 ADAMTSL2 FCN2 CEL SNORD36B WDR5 MIR3689C GFI1B RXRA FAM163B GBGT1 ADAMTS13 TMEM8C MIR6877 PPP1R26-AS1 LCN1 LOC100130548 SPACA9 DBH C9orf116 SLC2A6 MIR4669 MIR3689D1 MIR548AW GTF3C5 MRPS2 SURF4 LOC101448202 AK8 RNU6ATAC REXO4 OLFM1 LOC105376306 LOC101928525 C9orf62 RPL7A TSC1 ABO LOC101928193 SURF2 LOC401557 MIR3689E LINC00094 STKLD1 VAV2 BRD3 SNORD141A SNORD24 SURF1 SNORD36A CELP MIR3689B PPP1R26 COL5A1-AS1 SNORD36C MIR3689D2 COL5A1 LOC100996574 MED22 RALGDS |
nsv6746 | Chr.9:133044293 - 133068877 on Build GRCh38 | Insertion | GTF3C5 MIR6877 LOC100996574 CEL |
nsv615596 | Chr.9:133030314 - 133080285 on Build GRCh38 | Loss | GTF3C5 MIR6877 LOC100996574 LOC105376306 CEL |
nsv831744 | Chr.9:132980050 - 133174043 on Build GRCh38 | Gain+Loss | GBGT1 GTF3C5 SNORD141A MIR6877 CELP LOC100996574 GFI1B RALGDS LOC105376306 CEL |
nsv508564 | Chr.9:133013830 - 133073076 on Build GRCh38 | Deletion | GTF3C5 SNORD141A MIR6877 LOC100996574 LOC105376306 CEL |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |