Assay Details
Target Gene Details
Entrez Gene ID: | 9328 |
Gene Name: | general transcription factor IIIC subunit 5 |
Gene Aliases: |
TFIIIC63, TFIIICepsilon, TFiiiC2-63 |
Location: |
Chr.9:133030675-133058503 on Build GRCh38 |
Assay Gene Location: | Within Intron 3 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
GTF3C5 | NM_001122823.1 | NP_001116295.1 | ||
NM_001286709.1 | NP_001273638.1 | |||
NM_012087.3 | NP_036219.2 | |||
XM_005272234.3 | XP_005272291.1 | |||
XM_011519201.1 | XP_011517503.1 | |||
XM_017015315.1 | XP_016870804.1 | |||
XM_017015316.1 | XP_016870805.1 | |||
AF133124.1 | AAD41476.1 | |||
AJ420443.1 | ||||
AK000194.1 | BAA91001.1 | |||
AK024510.1 | ||||
AK055092.1 | ||||
AK097295.1 | BAC04993.1 | |||
AK225761.1 | ||||
AK293980.1 | ||||
AK311481.1 | ||||
AY007123.1 | AAG01991.1 | |||
BC009741.2 | AAH09741.2 | |||
BC011355.1 | AAH11355.1 | |||
BC017337.2 | AAH17337.1 | |||
BC030157.2 | AAH30157.2 | |||
BQ673969.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2739138 | Chr.9:132727483 - 135521553 on Build GRCh38 | Deletion | FCN1 ADAMTS13 TSC1 MIR3689D2 LOC105376306 GBGT1 WDR5 SNORD24 GTF3C5 SURF2 MIR548AW AK8 RALGDS MIR6877 SNORD36A ADAMTSL2 CELP LOC101928193 SNORD141A MIR3689A LOC100130548 SLC2A6 LOC101448202 SNORD36C LCN1 RPL7A RXRA SPACA9 PPP1R26-AS1 PPP1R26 C9orf62 SARDH ABO MIR3689D1 TMEM8C SURF1 MIR3689C COL5A1 CEL MIR4669 GFI1B OLFM1 MRPS2 MIR3689E VAV2 LOC100996574 STKLD1 COL5A1-AS1 LOC401557 OBP2B LINC00094 CACFD1 SURF6 FAM163B BRD3 DBH-AS1 RNU6ATAC C9orf116 SURF4 SNORD36B MED22 MIR3689F DBH LOC101928525 REXO4 FCN2 MIR3689B |
nsv6746 | Chr.9:133044293 - 133068877 on Build GRCh38 | Insertion | GTF3C5 CEL MIR6877 LOC100996574 |
nsv615596 | Chr.9:133030314 - 133080285 on Build GRCh38 | Loss | GTF3C5 CEL MIR6877 LOC105376306 LOC100996574 |
nsv831744 | Chr.9:132980050 - 133174043 on Build GRCh38 | Gain+Loss | GTF3C5 CELP SNORD141A CEL RALGDS GFI1B MIR6877 LOC105376306 LOC100996574 GBGT1 |
nsv508564 | Chr.9:133013830 - 133073076 on Build GRCh38 | Deletion | GTF3C5 SNORD141A CEL MIR6877 LOC105376306 LOC100996574 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |