Assay Details
Target Gene Details
Entrez Gene ID: | 9328 |
Gene Name: | general transcription factor IIIC subunit 5 |
Gene Aliases: |
TFIIIC63, TFIIICepsilon, TFiiiC2-63 |
Location: |
Chr.9:133030675-133058503 on Build GRCh38 |
Assay Gene Location: | Within Intron 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
GTF3C5 | NM_001122823.1 | NP_001116295.1 | ||
NM_001286709.1 | NP_001273638.1 | |||
NM_012087.3 | NP_036219.2 | |||
XM_005272234.3 | XP_005272291.1 | |||
XM_011519201.1 | XP_011517503.1 | |||
XM_017015315.1 | XP_016870804.1 | |||
XM_017015316.1 | XP_016870805.1 | |||
AF133124.1 | AAD41476.1 | |||
AJ420443.1 | ||||
AK000194.1 | BAA91001.1 | |||
AK055092.1 | ||||
AK097295.1 | BAC04993.1 | |||
AK225761.1 | ||||
AK293980.1 | ||||
AK311481.1 | ||||
AY007123.1 | AAG01991.1 | |||
BC009741.2 | AAH09741.2 | |||
BC011355.1 | AAH11355.1 | |||
BC017337.2 | AAH17337.1 | |||
BC030157.2 | AAH30157.2 | |||
BQ673969.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2739138 | Chr.9:132727483 - 135521553 on Build GRCh38 | Deletion | LOC100996574 DBH-AS1 VAV2 AK8 PPP1R26 MIR3689F CEL TMEM8C MIR3689D2 WDR5 ADAMTS13 C9orf116 SURF2 OBP2B RXRA COL5A1-AS1 GTF3C5 MIR3689C LOC401557 MRPS2 OLFM1 LOC101928193 RNU6ATAC MIR4669 CELP RALGDS REXO4 BRD3 LOC100130548 FCN1 MIR3689E STKLD1 MED22 CACFD1 TSC1 ABO GFI1B MIR6877 MIR3689D1 SLC2A6 SPACA9 MIR3689B FAM163B SARDH LINC00094 FCN2 LCN1 SURF4 RPL7A DBH SURF1 SNORD36C SNORD141A SURF6 COL5A1 PPP1R26-AS1 SNORD24 C9orf62 GBGT1 LOC101928525 LOC105376306 SNORD36B MIR3689A SNORD36A ADAMTSL2 LOC101448202 MIR548AW |
nsv615596 | Chr.9:133030314 - 133080285 on Build GRCh38 | Loss | LOC105376306 LOC100996574 CEL MIR6877 GTF3C5 |
nsv831744 | Chr.9:132980050 - 133174043 on Build GRCh38 | Gain+Loss | LOC105376306 LOC100996574 CELP CEL RALGDS SNORD141A GFI1B MIR6877 GTF3C5 GBGT1 |
nsv508564 | Chr.9:133013830 - 133073076 on Build GRCh38 | Deletion | LOC105376306 LOC100996574 CEL SNORD141A MIR6877 GTF3C5 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |