Assay Details
Target Gene Details
Entrez Gene ID: | 147429 |
Gene Name: | AQP4 antisense RNA 1 |
Gene Aliases: |
C18orf16, CHST9-AS1 |
Location: |
Chr.18:26865308-26935946 on Build GRCh38 |
Assay Gene Location: | Within Exon 8 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
AQP4-AS1 | NR_026908.1 | 8 | 1463 | |
AK055069.1 | 8 | 1463 | BAB70850.1 |
Target Gene Details
Entrez Gene ID: | 83539 |
Gene Name: | carbohydrate sulfotransferase 9 |
Gene Aliases: |
GALNAC4ST-2, GalNAc4ST2 |
Location: |
Chr.18:26908754-27185364 on Build GRCh38 |
Assay Gene Location: | Within Exon 7 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
CHST9 | NM_001256316.1 | NP_001243245.1 | ||
NM_031422.5 | NP_113610.2 | |||
XM_006722555.3 | 6 | 1359 | XP_006722618.1 | |
XM_017026033.1 | XP_016881522.1 | |||
XM_017026034.1 | XP_016881523.1 | |||
AF239821.1 | AAK01862.1 | |||
AF332472.1 | AAK30369.1 | |||
AF332473.1 | AAK30370.1 | |||
AK093349.1 | BAC04141.1 | |||
AY358488.1 | AAQ88852.1 | |||
BC025764.1 | AAH25764.2 | |||
BM919514.1 | ||||
KU178792.1 | ||||
KU178793.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv833600 | Chr.18:26893930 - 27101055 on Build GRCh38 | Gain | CHST9 AQP4-AS1 |
esv3893079 | Chr.18:26912135 - 27610887 on Build GRCh38 | Gain | LOC105372038 CHST9 AQP4-AS1 |
More Information
Additional Information:
For this assay, SNP(s) [rs183802753] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Exonic DGV Variation |