Assay Details
Target Gene Details
Entrez Gene ID: | 5578 |
Gene Name: | protein kinase C alpha |
Gene Aliases: |
AAG6, PKC-alpha, PKCA, PRKACA |
Location: |
Chr.17:66302640-66810744 on Build GRCh38 |
Assay Gene Location: | Within Intron 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PRKCA | NM_002737.2 | NP_002728.1 | ||
XM_017024836.1 | XP_016880325.1 | |||
XM_017024841.1 | XP_016880330.1 | |||
AB209475.1 | BAD92712.1 | |||
AB451258.1 | ||||
AB451383.1 | ||||
AY633609.1 | AAV33302.1 | |||
BC053321.1 | AAH53321.1 | |||
BC109273.1 | AAI09274.1 | |||
BC109274.1 | AAI09275.1 | |||
LC151409.1 | ||||
M22199.1 | AAA60098.1 | |||
X52479.1 | CAA36718.1 |
Target Gene Details
Entrez Gene ID: | 101928001 |
Gene Name: | PRKCA antisense RNA 1 |
Gene Aliases: |
- |
Location: |
Chr.17:66398069-66416854 on Build GRCh38 |
Assay Gene Location: | Overlaps - Exon 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PRKCA-AS1 | NR_110822.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv3582875 | Chr.17:66413661 - 66485920 on Build GRCh38 | Loss |
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esv3582876 | Chr.17:66415296 - 66431745 on Build GRCh38 | Loss |
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nsv457881 | Chr.17:66412731 - 66435948 on Build GRCh38 | Loss |
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nsv833520 | Chr.17:66261176 - 66438257 on Build GRCh38 | Gain |
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nsv575896 | Chr.17:66414797 - 66475557 on Build GRCh38 | Loss |
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nsv1064970 | Chr.17:66414666 - 66490150 on Build GRCh38 | Loss |
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![](/order/genome-database/details/genotyping/assets/img/arrow_icon_up_black.png)
More Information
Additional Information:
For this assay, SNP(s) [rs77351475] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
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Panther Classification:
Gene Ontology Categories:
![](/order/genome-database/details/genotyping/assets/img/arrow_icon_up_black.png)