Assay Details
Target Gene Details
Entrez Gene ID: | 83875 |
Gene Name: | beta-carotene oxygenase 2 |
Gene Aliases: |
B-DIOX-II, BCDO2 |
Location: |
Chr.11:112175485-112218929 on Build GRCh38 |
Assay Gene Location: | Within Intron 3 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
BCO2 | NM_001037290.2 | NP_001032367.2 | ||
NM_001256397.1 | NP_001243326.1 | |||
NM_001256398.1 | NP_001243327.1 | |||
NM_001256400.1 | NP_001243329.1 | |||
NM_031938.5 | NP_114144.4 | |||
AB096252.1 | ||||
AF276432.1 | AAK69433.1 | |||
AJ290393.1 | CAC27994.1 | |||
AK027801.1 | BAB55379.1 | |||
AK091783.1 | BAC03747.1 | |||
AK297853.1 | ||||
AK315300.1 | ||||
BC041656.1 | ||||
BX503569.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv525636 | Chr.11:112172891 - 112192531 on Build GRCh38 | Loss | BCO2 |
esv2761708 | Chr.11:112176838 - 112212857 on Build GRCh38 | Loss | BCO2 |
nsv972072 | Chr.11:112180775 - 112185355 on Build GRCh38 | Duplication | BCO2 |
esv2745077 | Chr.11:111949712 - 112188677 on Build GRCh38 | Deletion | TIMM8B IL18 DIXDC1 BCO2 C11orf57 DLAT TEX12 SDHD PIH1D2 |
nsv519192 | Chr.11:112160901 - 112193416 on Build GRCh38 | Gain | IL18 BCO2 TEX12 |
esv3579908 | Chr.11:112173319 - 112217076 on Build GRCh38 | Loss | BCO2 |
More Information
Additional Information:
For this assay, SNP(s) [rs77432512] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |