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Gene Symbol
CDH18
Assay Reference Genome
Location

Chr.5:19477318 on build GRCh38
Cytoband
5p14.3
Assay ID Hs06127100_cn
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Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 1016

Gene Name:

 cadherin 18

Gene Aliases:

 CDH14, CDH14L, CDH24

Location:

 Chr.5:19472930-20575902 on Build GRCh38

Assay Gene Location:

 Within Intron 23
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CDH18 NM_001167667.1 NP_001161139.1
NM_001291956.1 NP_001278885.1
NM_001291957.1 NP_001278886.1
NM_004934.3 NP_004925.1
XM_005248228.3 XP_005248285.1
XM_006714435.3 XP_006714498.1
XM_011513928.2 XP_011512230.1
XM_011513929.2 XP_011512231.1
XM_011513930.2 XP_011512232.1
XM_017008924.1 XP_016864413.1
XM_017008925.1 XP_016864414.1
XM_017008926.1 XP_016864415.1
XM_017008927.1 XP_016864416.1
XM_017008928.1 XP_016864417.1
XM_017008929.1 XP_016864418.1
XM_017008930.1 XP_016864419.1
XM_017008931.1 XP_016864420.1
XM_017008932.1 XP_016864421.1
XM_017008933.1 XP_016864422.1
XM_017008934.1 XP_016864423.1
XM_017008935.1 XP_016864424.1
XM_017008936.1 XP_016864425.1
XM_017008937.1 XP_016864426.1
XM_017008938.1 XP_016864427.1
XM_017008939.1 XP_016864428.1
XM_017008940.1 XP_016864429.1
XM_017008941.1 XP_016864430.1
AK289547.1
AK295087.1
AK308745.1
BC031051.1 AAH31051.1
U59325.1 AAB02933.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1031377 Chr.5:19289979 - 20971814 on Build GRCh38 Loss LOC105374676 CDH18
nsv597424 Chr.5:19381946 - 19751051 on Build GRCh38 Gain CDH18
nsv470997 Chr.5:19441626 - 19534696 on Build GRCh38 Loss CDH18
nsv4752 Chr.5:19449761 - 19482880 on Build GRCh38 Insertion CDH18

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More Information


Additional Information:

For this assay, SNP(s) [rs75345827] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

cadherin

Gene Ontology Categories:

Function(s) Process(es)


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