Assay Details
Target Gene Details
Entrez Gene ID: | 6419 |
Gene Name: | SET domain and mariner transposase fusion gene |
Gene Aliases: |
METNASE, Mar1 |
Location: |
Chr.3:4303304-4320649 on Build GRCh38 |
Assay Gene Location: | Within Exon 4 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SETMAR | XM_006713292.3 | 3 | 1874 | XP_006713355.1 |
XM_006713294.3 | 4 | 2163 | XP_006713357.1 | |
XM_017007032.1 | 3 | 2601 | XP_016862521.1 |
Target Gene Details
Entrez Gene ID: | 285362 |
Gene Name: | sulfatase modifying factor 1 |
Gene Aliases: |
AAPA3037, FGE, UNQ3037 |
Location: |
Chr.3:4034714-4467282 on Build GRCh38 |
Assay Gene Location: | Within Intron 10 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SUMF1 | XM_011533624.2 | XP_011531926.1 | ||
XM_011533625.2 | XP_011531927.1 | |||
XM_017006252.1 | XP_016861741.1 | |||
XM_017006253.1 | XP_016861742.1 | |||
XM_017006254.1 | XP_016861743.1 | |||
XM_017006255.1 | XP_016861744.1 | |||
AY358092.1 | AAQ88459.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv3575535 | Chr.3:4292219 - 4362841 on Build GRCh38 | Gain |
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dgv272n21 | Chr.3:4080585 - 4319799 on Build GRCh38 | Loss |
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esv3893640 | Chr.3:4196512 - 4421324 on Build GRCh38 | Loss |
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esv2759126 | Chr.3:4096685 - 4378673 on Build GRCh38 | Loss |
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esv3893632 | Chr.3:4315301 - 4378571 on Build GRCh38 | Loss |
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nsv589451 | Chr.3:4231805 - 4473507 on Build GRCh38 | Loss |
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nsv997886 | Chr.3:4294748 - 4373592 on Build GRCh38 | Gain |
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nsv1003234 | Chr.3:4298679 - 4344910 on Build GRCh38 | Gain |
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![](/order/genome-database/details/genotyping/assets/img/arrow_icon_up_black.png)
More Information
Set Membership: |
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Panther Classification:
Gene Ontology Categories:
![](/order/genome-database/details/genotyping/assets/img/arrow_icon_up_black.png)