Assay Details
Target Gene Details
Entrez Gene ID: | 84938 |
Gene Name: | autophagy related 4C cysteine peptidase |
Gene Aliases: |
APG4-C, APG4C, AUTL1, AUTL3 |
Location: |
Chr.1:62784106-62865270 on Build GRCh38 |
Assay Gene Location: | Within Intron 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
ATG4C | NM_032852.3 | NP_116241.2 | ||
NM_178221.2 | NP_835739.1 | |||
XM_005271288.2 | XP_005271345.1 | |||
XM_011542313.2 | XP_011540615.1 | |||
XM_017002600.1 | XP_016858089.1 | |||
XM_017002601.1 | XP_016858090.1 | |||
AK027773.1 | BAB55356.1 | |||
BC018678.1 | ||||
BC033024.1 | AAH33024.1 | |||
BI518482.1 | ||||
DB183325.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv3577901 | Chr.1:62787158 - 62814703 on Build GRCh38 | Loss | ATG4C |
More Information
Additional Information:
For this assay, SNP(s) [rs72278626] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |