Assay Details
Target Gene Details
Entrez Gene ID: | 6942 |
Gene Name: | transcription factor 20 |
Gene Aliases: |
AR1, SPBP, TCF-20 |
Location: |
Chr.22:42160013-42283927 on Build GRCh38 |
Assay Gene Location: | Within Intron 5 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
TCF20 | NM_005650.3 | NP_005641.1 | ||
NM_181492.2 | NP_852469.1 | |||
XM_005261722.3 | XP_005261779.1 | |||
XM_006724313.3 | XP_006724376.1 | |||
XM_011530353.2 | XP_011528655.1 | |||
XM_011530354.2 | XP_011528656.1 | |||
AB006630.1 | BAA22961.1 | |||
KF851355.1 | ||||
U19345.1 | AAC36392.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv3643 | Chr.22:42134472 - 42197574 on Build GRCh38 | Insertion | CYP2D7 LOC102723722 TCF20 |
nsv834210 | Chr.22:42057329 - 42209100 on Build GRCh38 | Loss | SMDT1 FAM109B CYP2D7 LOC102723722 CYP2D6 WBP2NL SNORD13P1 NDUFA6 NAGA NDUFA6-AS1 TCF20 |
More Information
Additional Information:
For this assay, SNP(s) [rs112991199] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |