Assay Details
Target Gene Details
Entrez Gene ID: | 51573 |
Gene Name: | glycerophosphodiester phosphodiesterase 1 |
Gene Aliases: |
363E6.2, MIR16 |
Location: |
Chr.16:19501693-19522145 on Build GRCh38 |
Assay Gene Location: | Within Intron 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
GDE1 | NM_001324066.1 | NP_001310995.1 | ||
NM_001324067.1 | NP_001310996.1 | |||
NM_016641.3 | NP_057725.1 | |||
NR_136689.1 | ||||
AF212862.1 | AAF65234.1 | |||
AF306698.1 | ||||
AK312912.1 | ||||
AY463154.1 | AAR25624.1 | |||
BC014981.1 | AAH14981.1 | |||
BC025273.1 | AAH25273.1 | |||
BQ897064.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv833163 | Chr.16:19457512 - 19628716 on Build GRCh38 | Gain | CCP110 TMC5 GDE1 C16orf62 |
nsv571582 | Chr.16:19038056 - 19790801 on Build GRCh38 | Gain | LOC102723385 TMC7 CCP110 ITPRIPL2 TMC5 GDE1 CLEC19A KNOP1 C16orf62 IQCK COQ7 SYT17 |
nsv436835 | Chr.16:18930652 - 21500976 on Build GRCh38 | Insertion | LYRM1 PDILT GPR139 LOC100190986 C16orf62 GPRC5B DNAH3 ACSM2A SYT17 CRYM CCP110 COQ7 GP2 TMEM159 ERI2 TMC7 ZP2 ANKS4B ITPRIPL2 ACSM2B SMG1P3 TMC5 LOC81691 ACSM1 GDE1 KNOP1 IQCK CRYM-AS1 THUMPD1 LOC102723385 NPIPB3 UMOD ACSM3 CLEC19A ACSM5 DCUN1D3 SNX29P1 |
More Information
Additional Information:
For this assay, SNP(s) [rs114022593] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |