Hs05430466_cn

• Gene Symbol: GPT2
• Assay Reference Genome Location: Chr.16:46907893 on build GRCh38
• Cytoband: 16q11.2

Target Gene Details

• Entrez Gene ID: 84706
• Gene Name: glutamic--pyruvic transaminase 2
• Gene Aliases: ALT2, GPT 2, MRT49
• Location: Chr.16:46884380-46931297 on Build GRCh38
• Assay Gene Location: Within Intron 8

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
GPT2	NM_001142466.2			NP_001135938.1
	NM_133443.3			NP_597700.1
	XM_017023790.1			XP_016879279.1
	AK094971.1			BAC04465.1
	AY029173.2			AAK31794.2
	BC062555.1			AAH62555.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1066115	Chr.16:46429858 - 47284504 on Build GRCh38	Gain	NETO2 ITFG1 VPS35 DNAJA2 ANKRD26P1 SHCBP1 GPT2 C16orf87 MYLK3 ORC6 ITFG1-AS1
nsv1063660	Chr.16:46896711 - 46944880 on Build GRCh38	Gain	GPT2

More Information

Additional Information:

For this assay, SNP(s) [rs200990376] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

transaminase

Gene Ontology Categories:

Process(es)

2-oxoglutarate metabolic process
cellular amino acid biosynthetic process
L-alanine metabolic process
L-alanine catabolic process

Function(s)

L-alanine:2-oxoglutarate aminotransferase activity
pyridoxal phosphate binding