Assay Details
Target Gene Details
Entrez Gene ID: | 10021 |
Gene Name: | hyperpolarization activated cyclic nucleotide gated potassium channel 4 |
Gene Aliases: |
SSS2 |
Location: |
Chr.15:73319859-73369264 on Build GRCh38 |
Assay Gene Location: | Within Intron 3 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
HCN4 | NM_005477.2 | NP_005468.1 | ||
XM_011521148.2 | XP_011519450.1 | |||
AJ132429.1 | CAB42604.1 | |||
AJ238850.1 | CAB52754.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv524049 | Chr.15:73320492 - 73387960 on Build GRCh38 | Loss | HCN4 LOC107984728 |
nsv569949 | Chr.15:73320036 - 73387960 on Build GRCh38 | Loss | HCN4 LOC107984728 |
nsv1121512 | Chr.15:72670085 - 75273877 on Build GRCh38 | Deletion | LOC105376731 REC114 HCN4 ISLR ULK3 LOC107984728 CCDC33 ARID3B COX5A LOC102723750 SCAMP2 UBL7 MIR6882 CPLX3 ISLR2 CYP11A1 CD276 LOC729739 SEMA7A LOXL1-AS1 PPCDC LOXL1 MIR6881 NEO1 NPTN-IT1 CYP1A2 BBS4 TBC1D21 UBL7-AS1 LOC283731 STRA6 LOC101929333 C15orf59-AS1 SCAMP5 C15orf39 MPI CSK ADPGK-AS1 C15orf59 GOLGA6A EDC3 CYP1A1 FAM219B LMAN1L CLK3 ADPGK NPTN MIR4513 GOLGA6C RPP25 HIGD2B LOC732265 STOML1 PML |
More Information
Additional Information:
For this assay, SNP(s) [rs79555716] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |