Assay Details
Target Gene Details
Entrez Gene ID: | 79834 |
Gene Name: | pseudopodium enriched atypical kinase 1 |
Gene Aliases: |
SGK269 |
Location: |
Chr.15:77100829-77420104 on Build GRCh38 |
Assay Gene Location: | Within Intron 18 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PEAK1 | XM_011522040.1 | XP_011520342.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2749898 | Chr.15:75764003 - 77933523 on Build GRCh38 | Deletion | ETFA NRG4 UBE2Q2 MIR3713 PEAK1 LOC101929439 FBXO22-AS1 LINGO1-AS2 LOC645752 LINGO1-AS1 TSPAN3 TMEM266 LOC101929457 TYRO3P LOC441728 LINGO1 PSTPIP1 FBXO22 RCN2 HMG20A ISL2 LINC00597 SCAPER |
nsv1040852 | Chr.15:76867896 - 77845199 on Build GRCh38 | Gain | LOC101929457 LINGO1 PSTPIP1 RCN2 PEAK1 HMG20A LINGO1-AS2 LINGO1-AS1 TSPAN3 LINC00597 SCAPER |
More Information
Additional Information:
For this assay, SNP(s) [rs138051579] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |