Assay Details
Target Gene Details
Entrez Gene ID: | 838 |
Gene Name: | caspase 5 |
Gene Aliases: |
ICE(rel)III, ICEREL-III, ICH-3 |
Location: |
Chr.11:104994240-105023902 on Build GRCh38 |
Assay Gene Location: | Within Intron 3 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
CASP5 | NM_001136109.1 | NP_001129581.1 | ||
NM_001136110.1 | NP_001129582.1 | |||
NM_001136112.1 | NP_001129584.1 | |||
NM_004347.3 | NP_004338.3 | |||
NR_024239.1 | ||||
NR_036562.1 | ||||
XM_011543021.2 | XP_011541323.1 | |||
AK296660.1 | ||||
BC074994.2 | AAH74994.1 | |||
BC113406.1 | ||||
DQ228672.1 | ||||
DQ228673.1 | ||||
DQ228676.1 | ||||
DQ228677.1 | ||||
DR005081.1 | ||||
U28015.1 | AAA75172.1 | |||
X94993.1 | CAA64450.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv556219 | Chr.11:105004534 - 105047790 on Build GRCh38 | Loss | CARD16 CASP5 CASP1 |
nsv1052674 | Chr.11:104111970 - 107043401 on Build GRCh38 | Loss | GUCY1A2 PDGFD GRIA4 CARD18 LOC643733 CASP1 LOC102723895 CASP4 KBTBD3 CASP1P2 CARD16 CASP5 CARD17 AASDHPPT MIR7641-1 MSANTD4 LOC105369473 LOC101928535 CASP12 |
esv2750978 | Chr.11:104094062 - 105475331 on Build GRCh38 | Gain | CASP1P2 PDGFD CARD16 CARD18 LOC643733 CASP5 CARD17 MIR7641-1 CASP1 LOC102723895 CASP4 CASP12 |
nsv1046098 | Chr.11:104336482 - 105132934 on Build GRCh38 | Loss | CASP1P2 CARD16 LOC643733 CASP5 CARD17 CASP1 LOC102723895 CASP4 CASP12 |
nsv1041081 | Chr.11:104927048 - 105041731 on Build GRCh38 | Loss | CARD16 CASP5 CASP1 CASP4 |
nsv468862 | Chr.11:104903287 - 105372644 on Build GRCh38 | Gain | CASP1P2 CARD16 CARD18 LOC643733 CASP5 CARD17 CASP1 CASP4 |
nsv1038877 | Chr.11:104166130 - 105422422 on Build GRCh38 | Gain | CASP1P2 CARD16 CARD18 LOC643733 CASP5 CARD17 MIR7641-1 CASP1 LOC102723895 CASP4 CASP12 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |