Assay Details
Target Gene Details
Entrez Gene ID: | 23529 |
Gene Name: | cardiotrophin-like cytokine factor 1 |
Gene Aliases: |
BSF-3, BSF3, CISS2, CLC, NNT-1, NNT1, NR6 |
Location: |
Chr.11:67364168-67374177 on Build GRCh38 |
Assay Gene Location: | Within Intron 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
CLCF1 | NM_001166212.1 | NP_001159684.1 | ||
NM_013246.2 | NP_037378.1 | |||
AF172854.1 | AAD54284.1 | |||
AF176911.1 | AAF00991.1 | |||
AK298052.1 | ||||
AY049779.1 | AAL15436.1 | |||
BC012939.1 | AAH12939.1 | |||
BC066229.1 | AAH66229.1 | |||
BC066230.1 | AAH66230.1 | |||
BC066231.1 | AAH66231.1 | |||
BM846622.1 | ||||
DC393345.1 |
Target Gene Details
Entrez Gene ID: | 100130987 |
Gene Name: | uncharacterized LOC100130987 |
Gene Aliases: |
- |
Location: |
Chr.11:67317839-67391687 on Build GRCh38 |
Assay Gene Location: | Within Intron 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
LOC100130987 | NR_024469.1 | |||
AK096155.1 | ||||
DA400240.1 | ||||
DB058546.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
dgv52n111 | Chr.11:67362651 - 67521123 on Build GRCh38 | Deletion | CLCF1 RAD9A PPP1CA PITPNM1 GPR152 PTPRCAP CORO1B AIP RPS6KB2 CABP2 MIR6752 LOC100130987 CABP4 CDK2AP2 TBC1D10C TMEM134 CARNS1 |
nsv555253 | Chr.11:67265605 - 67397024 on Build GRCh38 | Loss | SSH3 CLCF1 RAD9A LOC100130987 GRK2 POLD4 ANKRD13D |
More Information
Additional Information:
For this assay, SNP(s) [rs79442357] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |