Assay Details
Target Gene Details
Entrez Gene ID: | 58504 |
Gene Name: | Rho GTPase activating protein 22 |
Gene Aliases: |
RhoGAP2, RhoGap22 |
Location: |
Chr.10:48429831-48656265 on Build GRCh38 |
Assay Gene Location: | Within Intron 17 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
ARHGAP22 | XM_011540013.2 | XP_011538315.1 | ||
XM_017016473.1 | XP_016871962.1 | |||
XM_017016476.1 | XP_016871965.1 |
Target Gene Details
Entrez Gene ID: | 5599 |
Gene Name: | mitogen-activated protein kinase 8 |
Gene Aliases: |
JNK, JNK-46, JNK1, JNK1A2, JNK21B1/2, PRKM8, SAPK1, SAPK1c |
Location: |
Chr.10:48306639-48439360 on Build GRCh38 |
Assay Gene Location: | Within Exon 15 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
MAPK8 | NM_001278547.1 | 12 | 2792 | NP_001265476.1 |
NM_001278548.1 | 10 | 2386 | NP_001265477.1 | |
NM_001323302.1 | 14 | 3060 | NP_001310231.1 | |
NM_001323320.1 | 11 | 2564 | NP_001310249.1 | |
NM_001323321.1 | 12 | 2797 | NP_001310250.1 | |
NM_001323322.1 | 14 | 3055 | NP_001310251.1 | |
NM_001323323.1 | 13 | 2861 | NP_001310252.1 | |
NM_001323324.1 | 12 | 2797 | NP_001310253.1 | |
NM_001323325.1 | 13 | 2991 | NP_001310254.1 | |
NM_001323326.1 | 13 | 2866 | NP_001310255.1 | |
NM_001323327.1 | 13 | 2991 | NP_001310256.1 | |
NM_001323328.1 | 13 | 2861 | NP_001310257.1 | |
NM_001323329.1 | 12 | 2792 | NP_001310258.1 | |
NM_001323330.1 | 13 | 2986 | NP_001310259.1 | |
NM_001323331.1 | 13 | 2986 | NP_001310260.1 | |
NM_139046.3 | 14 | 3060 | NP_620634.1 | |
NM_139049.3 | 14 | 3055 | NP_620637.1 | |
NR_136583.1 | 12 | 2793 | ||
NR_136584.1 | 12 | 2788 | ||
NR_136585.1 | 12 | 2793 | ||
AL137667.1 | 3 | 3477 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv519701 | Chr.10:48428464 - 48443306 on Build GRCh38 | Loss |
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nsv1039508 | Chr.10:48387675 - 48446360 on Build GRCh38 | Gain |
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nsv1042677 | Chr.10:47993784 - 49928329 on Build GRCh38 | Loss |
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More Information
Additional Information:
For this assay, SNP(s) [rs118023498] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
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Panther Classification:
Gene Ontology Categories:
![](/order/genome-database/details/genotyping/assets/img/arrow_icon_up_black.png)