Assay Details
Target Gene Details
Entrez Gene ID: | 9328 |
Gene Name: | general transcription factor IIIC subunit 5 |
Gene Aliases: |
TFIIIC63, TFIIICepsilon, TFiiiC2-63 |
Location: |
Chr.9:133030675-133058503 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
GTF3C5 | NM_001122823.1 | NP_001116295.1 | ||
NM_001286709.1 | NP_001273638.1 | |||
NM_012087.3 | NP_036219.2 | |||
XM_005272234.3 | XP_005272291.1 | |||
XM_011519201.1 | XP_011517503.1 | |||
XM_017015315.1 | XP_016870804.1 | |||
XM_017015316.1 | XP_016870805.1 | |||
AF133124.1 | AAD41476.1 | |||
AJ420443.1 | ||||
AK000194.1 | BAA91001.1 | |||
AK055092.1 | ||||
AK097295.1 | BAC04993.1 | |||
AK225761.1 | ||||
AK293980.1 | ||||
AK311481.1 | ||||
AY007123.1 | AAG01991.1 | |||
BC011355.1 | AAH11355.1 | |||
BC017337.2 | AAH17337.1 | |||
BC030157.2 | AAH30157.2 | |||
BQ673969.1 | ||||
DB194811.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2739138 | Chr.9:132727483 - 135521553 on Build GRCh38 | Deletion | DBH-AS1 LOC401557 GFI1B TMEM8C SNORD141A MIR3689D1 SURF4 MRPS2 BRD3 RPL7A ABO VAV2 MIR3689C LOC101928193 GTF3C5 FAM163B FCN1 RALGDS LOC100996574 SNORD36A COL5A1 SNORD36C CACFD1 WDR5 FCN2 SURF1 SPACA9 MIR3689F PPP1R26 C9orf62 REXO4 LOC101448202 CEL MIR548AW LINC00094 LCN1 OBP2B SURF6 MIR3689B MED22 RNU6ATAC AK8 STKLD1 SURF2 MIR4669 GBGT1 MIR6877 CELP OLFM1 LOC101928525 DBH TSC1 SNORD36B MIR3689D2 PPP1R26-AS1 MIR3689A LOC100130548 SARDH ADAMTS13 LOC105376306 ADAMTSL2 MIR3689E C9orf116 RXRA COL5A1-AS1 SLC2A6 SNORD24 |
nsv615596 | Chr.9:133030314 - 133080285 on Build GRCh38 | Loss | LOC100996574 LOC105376306 GTF3C5 CEL MIR6877 |
nsv831744 | Chr.9:132980050 - 133174043 on Build GRCh38 | Gain+Loss | LOC100996574 GFI1B LOC105376306 SNORD141A GTF3C5 CEL GBGT1 RALGDS MIR6877 CELP |
nsv508564 | Chr.9:133013830 - 133073076 on Build GRCh38 | Deletion | LOC100996574 LOC105376306 SNORD141A GTF3C5 CEL MIR6877 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |