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See other LOC100507156 CNV Assays ›
Gene Symbol
LOC100507156
Assay Reference Genome
Location

Chr.8:23363412 on build GRCh38
Cytoband
8p21.3
Assay ID Hs05039408_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 100507156

Gene Name:

 uncharacterized LOC100507156

Gene Aliases:

 -

Location:

 Chr.8:23336208-23366125 on Build GRCh38

Assay Gene Location:

 Within Exon 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LOC100507156 NR_038323.1 3 1661
AL833246.1 3 1661

Target Gene Details

Entrez Gene ID:

 4017

Gene Name:

 lysyl oxidase like 2

Gene Aliases:

 LOR2, WS9-14

Location:

 Chr.8:23296897-23404209 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LOXL2 NM_002318.2 NP_002309.1
AK222477.1 BAD96197.1
AK293292.1
AK312266.1
BC000594.2 AAH00594.1
KF928961.1
KF975332.1
U89942.1 AAB49697.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv7139n100 Chr.8:23292116 - 23464357 on Build GRCh38 Loss LOC100507156 ENTPD4 R3HCC1 LOXL2
nsv6118 Chr.8:23361537 - 23395190 on Build GRCh38 Insertion LOC100507156 LOXL2
nsv831268 Chr.8:23357001 - 23538079 on Build GRCh38 Gain LOC100507156 ENTPD4 SLC25A37 LOXL2
nsv1026345 Chr.8:23302920 - 23541056 on Build GRCh38 Gain LOC100507156 ENTPD4 SLC25A37 LOXL2
nsv1017570 Chr.8:22969562 - 23544783 on Build GRCh38 Gain LOC107984124 LOC389641 TNFRSF10C R3HCC1 LOXL2 LOC254896 LOC286059 TNFRSF10A RHOBTB2 LOC100507156 TNFRSF10B ENTPD4 SLC25A37 CHMP7 TNFRSF10D

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More Information


Additional Information:

For this assay, SNP(s) [rs138559756,rs73549812] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Exonic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

oxidase

Gene Ontology Categories:

Function(s) Process(es)


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