Assay Details
Target Gene Details
Entrez Gene ID: | 146167 |
Gene Name: | solute carrier family 38 member 8 |
Gene Aliases: |
FVH2 |
Location: |
Chr.16:84009667-84043372 on Build GRCh38 |
Assay Gene Location: | Within Intron 10 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SLC38A8 | NM_001080442.2 | NP_001073911.1 | ||
XM_017022946.1 | XP_016878435.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv528396 | Chr.16:83937637 - 84050522 on Build GRCh38 | Loss | LOC105371371 OSGIN1 NECAB2 SLC38A8 |
nsv1065790 | Chr.16:83830329 - 84243597 on Build GRCh38 | Loss | HSDL1 MBTPS1 TAF1C LOC729887 MLYCD LOC105371371 OSGIN1 KCNG4 NECAB2 SLC38A8 DNAAF1 ADAD2 |
esv2761930 | Chr.16:84007420 - 84312461 on Build GRCh38 | Gain | HSDL1 MBTPS1 TAF1C LOC729887 LOC105376777 WFDC1 KCNG4 SLC38A8 DNAAF1 ADAD2 |
esv2763146 | Chr.16:84007991 - 84015025 on Build GRCh38 | Loss | SLC38A8 |
dgv546e214 | Chr.16:84011032 - 84095132 on Build GRCh38 | Gain | MBTPS1 SLC38A8 |
dgv5261n54 | Chr.16:84004904 - 84047164 on Build GRCh38 | Loss | SLC38A8 |
esv3639405 | Chr.16:83969606 - 84018131 on Build GRCh38 | Loss | NECAB2 SLC38A8 |
dgv3056n100 | Chr.16:83923502 - 84039073 on Build GRCh38 | Loss | LOC105371371 OSGIN1 NECAB2 SLC38A8 |
nsv471106 | Chr.16:83921780 - 84014793 on Build GRCh38 | Gain | LOC105371371 OSGIN1 NECAB2 SLC38A8 |
nsv1067050 | Chr.16:83990319 - 84039073 on Build GRCh38 | Loss | NECAB2 SLC38A8 |
nsv457595 | Chr.16:84013110 - 84091665 on Build GRCh38 | Gain | MBTPS1 SLC38A8 |
More Information
Additional Information:
For this assay, SNP(s) [rs148424835] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |