Assay Details
Target Gene Details
Entrez Gene ID: | 92292 |
Gene Name: | glycine-N-acyltransferase like 1 |
Gene Aliases: |
GATF-C, GNAT |
Location: |
Chr.11:58927629-58957074 on Build GRCh38 |
Assay Gene Location: | Within Intron 8 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
GLYATL1 | NM_001220494.2 | NP_001207423.1 | ||
NM_001220496.2 | NP_001207425.1 | |||
NM_080661.4 | NP_542392.2 | |||
XM_011545354.2 | XP_011543656.1 | |||
XM_011545355.2 | XP_011543657.1 | |||
XM_011545356.2 | XP_011543658.1 | |||
XM_011545357.2 | XP_011543659.1 | |||
XM_011545358.2 | XP_011543660.1 | |||
XM_011545359.2 | XP_011543661.1 | |||
AB207212.1 | ||||
AF087878.1 | AAP97178.1 | |||
AK055818.1 | BAB71023.1 | |||
AK091965.1 | BAC03779.1 | |||
AK130017.1 | ||||
AK300479.1 | ||||
BC008353.1 | AAH08353.1 | |||
DC339353.1 | ||||
DQ084381.1 |
Target Gene Details
Entrez Gene ID: | 283194 |
Gene Name: | uncharacterized LOC283194 |
Gene Aliases: |
- |
Location: |
Chr.11:58933643-59058452 on Build GRCh38 |
Assay Gene Location: | Within Intron 5 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
LOC283194 | NR_033853.2 | |||
AK091446.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
dgv14n68 | Chr.11:58932624 - 59111366 on Build GRCh38 | Gain | FAM111B GLYATL1P1 LOC283194 GLYATL1 |
dgv139e201 | Chr.11:58845738 - 59113363 on Build GRCh38 | Deletion | FAM111B GLYATL1P2 GLYATL2 GLYATL1P1 LOC283194 LOC100287413 GLYATL1 |
nsv1050013 | Chr.11:58627125 - 59453617 on Build GRCh38 | Gain | DTX4 OR5AN1 OR5A2 GLYAT GLYATL1P2 OR5A1 MPEG1 GLYATL1P1 LOC283194 LOC105369314 LOC100287413 GLYATL1 FAM111A FAM111B GLYATL2 LOC101927204 |
nsv482929 | Chr.11:58932626 - 59094208 on Build GRCh38 | Gain | GLYATL1P1 LOC283194 GLYATL1 |
esv2759830 | Chr.11:58932619 - 59241200 on Build GRCh38 | Gain | DTX4 FAM111B MPEG1 GLYATL1P1 LOC283194 GLYATL1 LOC101927204 FAM111A |
More Information
Additional Information:
For this assay, SNP(s) [rs76178604] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |