Assay Details
Target Gene Details
Entrez Gene ID: | 55326 |
Gene Name: | 1-acylglycerol-3-phosphate O-acyltransferase 5 |
Gene Aliases: |
1AGPAT5, LPAATE |
Location: |
Chr.8:6708357-6761503 on Build GRCh38 |
Assay Gene Location: | Within Intron 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
AGPAT5 | NM_018361.3 | NP_060831.2 | ||
XM_011534751.2 | XP_011533053.1 | |||
AF375789.1 | AAK54809.1 | |||
AK002072.1 | BAA92069.1 | |||
AK310545.1 | ||||
AL136587.1 | CAB66522.1 | |||
BC023550.2 | AAH23550.1 | |||
BC068519.1 | AAH68519.1 | |||
BC080537.1 | AAH80537.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv1021684 | Chr.8:6492570 - 6951933 on Build GRCh38 | Loss | DEFA8P MCPH1 DEFA4 GS1-24F4.2 MIR4659B XKR5 DEFA6 MIR8055 MCPH1-AS1 AGPAT5 DEFB1 ANGPT2 MIR4659A |
nsv610004 | Chr.8:6544845 - 6915391 on Build GRCh38 | Gain | GS1-24F4.2 MIR4659B XKR5 MIR8055 MCPH1-AS1 AGPAT5 DEFB1 ANGPT2 MCPH1 MIR4659A |
nsv1025976 | Chr.8:6615427 - 6829450 on Build GRCh38 | Loss | MIR4659B XKR5 MIR8055 MCPH1-AS1 AGPAT5 MCPH1 MIR4659A |
nsv6059 | Chr.8:6693878 - 6726740 on Build GRCh38 | Insertion | MCPH1-AS1 AGPAT5 |
esv2422383 | Chr.8:6504868 - 6924071 on Build GRCh38 | Duplication | GS1-24F4.2 MIR4659B XKR5 MIR8055 MCPH1-AS1 AGPAT5 DEFB1 ANGPT2 MCPH1 MIR4659A |
nsv831220 | Chr.8:6670324 - 6870969 on Build GRCh38 | Gain | GS1-24F4.2 MIR4659B XKR5 MCPH1-AS1 AGPAT5 DEFB1 MIR4659A |
nsv610006 | Chr.8:6710680 - 7063882 on Build GRCh38 | Gain | DEFA9P DEFT1P2 DEFA11P DEFT1P DEFA10P DEFA8P DEFA4 DEFA3 GS1-24F4.2 MIR4659B XKR5 DEFA1B DEFA6 DEFA5 DEFA1 AGPAT5 DEFB1 MIR4659A DEFA7P |
nsv1031577 | Chr.8:6712833 - 8008628 on Build GRCh38 | Gain | DEFA9P DEFT1P DEFA3 USP17L1 DEFA6 DEFB106B DEFB107B PRR23D1 DEFA7P DEFA10P USP17L3 DEFB4B DEFA4 DEFB108P1 XKR5 LOC107986910 DEFB105B DEFB103A AGPAT5 SPAG11A LOC101928095 DEFB105A USP17L8 DEFT1P2 LOC101929400 OR7E125P MIR4659B DEFA1B PRR23D2 FAM66E USP17L4 DEFB109P1B DEFB104B DEFB106A FAM66B OR7E154P DEFA11P DEFB103B DEFA8P FAM90A10P GS1-24F4.2 DEFB104A LINC00965 DEFB4A DEFA5 DEFA1 FAM90A7P SPAG11B DEFB1 ZNF705G ZNF705B DEFB107A MIR4659A |
dgv6876n100 | Chr.8:6687977 - 6812428 on Build GRCh38 | Loss | MIR4659B XKR5 MCPH1-AS1 AGPAT5 MIR4659A |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |