Assay Details
Target Gene Details
Entrez Gene ID: | 7884 |
Gene Name: | stem-loop binding protein |
Gene Aliases: |
HBP |
Location: |
Chr.4:1692731-1712741 on Build GRCh38 |
Assay Gene Location: | Within Exon 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SLBP | NM_001306074.1 | 1 | 459 | NP_001293003.1 |
NM_001306075.1 | 1 | 459 | NP_001293004.1 | |
NM_006527.3 | 1 | 459 | NP_006518.1 | |
AK091735.1 | ||||
AK093314.1 | 1 | 66 | ||
AK094257.1 | 1 | 273 | ||
AK300826.1 | ||||
AK315635.1 | ||||
BC014908.1 | AAH14908.1 | |||
BC015703.1 | AAH15703.1 | |||
DB027411.1 | 1 | 66 | ||
DB031118.1 | 1 | 66 | ||
DC383752.1 | ||||
U75679.1 | AAB97091.1 | |||
Z71188.1 | CAA94918.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv428434 | Chr.4:1623665 - 1813048 on Build GRCh38 | Gain | LETM1 TACC3 SLBP TMEM129 FGFR3 FAM53A |
nsv949756 | Chr.4:1710274 - 1817773 on Build GRCh38 | Deletion | LETM1 TACC3 SLBP TMEM129 FGFR3 |
dgv8901n54 | Chr.4:1644637 - 1864631 on Build GRCh38 | Loss | LETM1 TACC3 SLBP TMEM129 FGFR3 FAM53A |
nsv593316 | Chr.4:1526039 - 1768630 on Build GRCh38 | Gain | TACC3 SLBP TMEM129 FAM53A |
nsv508989 | Chr.4:1623823 - 1846590 on Build GRCh38 | Insertion | LETM1 TACC3 SLBP TMEM129 FGFR3 FAM53A |
nsv1161027 | Chr.4:1699833 - 1750693 on Build GRCh38 | Deletion | TACC3 SLBP TMEM129 |
nsv470000 | Chr.4:1522203 - 1722852 on Build GRCh38 | Loss | TACC3 SLBP TMEM129 FAM53A |
More Information
Additional Information:
For this assay, SNP(s) [rs181032842] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Exonic DGV Variation |