Assay Details
Target Gene Details
Entrez Gene ID: | 10732 |
Gene Name: | transcription factor like 5 |
Gene Aliases: |
CHA, E2BP-1, Figlb, bHLHe82 |
Location: |
Chr.20:62841014-62861763 on Build GRCh38 |
Assay Gene Location: | Within Intron 6 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
TCFL5 | NM_006602.3 | NP_006593.2 | ||
XM_005260185.3 | XP_005260242.1 | |||
XM_011528497.2 | XP_011526799.1 | |||
XM_011528499.1 | XP_011526801.1 | |||
AB012124.1 | BAA36557.1 | |||
AF070992.1 | AAD53986.1 | |||
AJ271337.1 | CAC24700.1 | |||
BC046933.1 | AAH46933.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv834027 | Chr.20:62707655 - 62874914 on Build GRCh38 | Loss | MRGBP LOC107985428 NTSR1 OGFR LOC107987285 OGFR-AS1 TCFL5 COL9A3 DPH3P1 LINC00659 |
nsv828794 | Chr.20:62832958 - 62880035 on Build GRCh38 | Loss | DIDO1 TCFL5 COL9A3 DPH3P1 |
nsv9825 | Chr.20:62775470 - 63601330 on Build GRCh38 | Gain | BHLHE23 FNDC11 OGFR PTK6 LOC102723788 HAR1B TCFL5 FLJ16779 MIR3196 HAR1A BIRC7 PPDPF MRGBP LOC107985428 MIR124-3 EEF1A2 SLC17A9 KCNQ2 LINC00029 LOC63930 SRMS DPH3P1 LOC107985425 CHRNA4 LOC100130152 NKAIN4 YTHDF1 LOC100130587 ARFGAP1 MIR4326 COL20A1 GID8 COL9A3 GMEB2 LINC01056 OGFR-AS1 DIDO1 LINC00659 HELZ2 |
nsv428380 | Chr.20:62632018 - 62935383 on Build GRCh38 | Loss | SLCO4A1-AS1 NTSR1 OGFR TCFL5 COL9A3 MRGBP LOC107985428 SLCO4A1 LOC107987285 OGFR-AS1 DIDO1 DPH3P1 LINC00659 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |