Hs04054057_cn

• Gene Symbol: VSTM2L
• Assay Reference Genome Location: Chr.20:37904597 on build GRCh38
• Cytoband: 20q11.23

Target Gene Details

• Entrez Gene ID: 128434
• Gene Name: V-set and transmembrane domain containing 2 like
• Gene Aliases: C20orf102, dJ1118M15.2
• Location: Chr.20:37903097-37945350 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
VSTM2L	NM_080607.2			NP_542174.1
	XM_011528530.1			XP_011526832.1
	AK056177.1			BAB71113.1
	AL834410.1			CAD39072.2
	BC033818.1			AAH33818.1
	BE905791.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv833970	Chr.20:37817358 - 37909509 on Build GRCh38	Gain	CTNNBL1 VSTM2L
nsv1066778	Chr.20:37849676 - 37921323 on Build GRCh38	Gain	CTNNBL1 VSTM2L
nsv1057334	Chr.20:37793679 - 38139909 on Build GRCh38	Loss	CTNNBL1 VSTM2L TGM2 RPRD1B TTI1

More Information

Additional Information:

For this assay, SNP(s) [rs77609510] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

immunoglobulin receptor superfamily

Gene Ontology Categories:

Process(es)

negative regulation of neuron apoptotic process

Function(s)

protein binding