Assay Details
Target Gene Details
Entrez Gene ID: | 10732 |
Gene Name: | transcription factor like 5 |
Gene Aliases: |
CHA, E2BP-1, Figlb, bHLHe82 |
Location: |
Chr.20:62841014-62861763 on Build GRCh38 |
Assay Gene Location: | Within Intron 6 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
TCFL5 | NM_006602.3 | NP_006593.2 | ||
XM_005260185.3 | XP_005260242.1 | |||
XM_011528497.2 | XP_011526799.1 | |||
XM_011528499.1 | XP_011526801.1 | |||
AB012124.1 | BAA36557.1 | |||
AF070992.1 | AAD53986.1 | |||
AJ271337.1 | CAC24700.1 | |||
BC046933.1 | AAH46933.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv834027 | Chr.20:62707655 - 62874914 on Build GRCh38 | Loss | TCFL5 COL9A3 MRGBP LOC107985428 OGFR OGFR-AS1 LOC107987285 NTSR1 DPH3P1 LINC00659 |
nsv828794 | Chr.20:62832958 - 62880035 on Build GRCh38 | Loss | TCFL5 COL9A3 DIDO1 DPH3P1 |
nsv9825 | Chr.20:62775470 - 63601330 on Build GRCh38 | Gain | COL9A3 PPDPF OGFR SLC17A9 LOC102723788 OGFR-AS1 HAR1A EEF1A2 LINC00659 LINC00029 BHLHE23 TCFL5 MIR124-3 HAR1B FNDC11 GMEB2 BIRC7 MIR3196 YTHDF1 CHRNA4 ARFGAP1 MIR4326 GID8 LOC107985428 LOC107985425 COL20A1 LINC01056 HELZ2 MRGBP LOC100130587 LOC100130152 DIDO1 KCNQ2 LOC63930 FLJ16779 DPH3P1 PTK6 NKAIN4 SRMS |
nsv428380 | Chr.20:62632018 - 62935383 on Build GRCh38 | Loss | COL9A3 LOC107985428 OGFR OGFR-AS1 NTSR1 SLCO4A1 LINC00659 TCFL5 MRGBP DIDO1 LOC107987285 DPH3P1 SLCO4A1-AS1 |
esv3646297 | Chr.20:62847710 - 62848185 on Build GRCh38 | Loss | TCFL5 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |