Assay Details
Target Gene Details
Entrez Gene ID: | 57333 |
Gene Name: | reticulocalbin 3 |
Gene Aliases: |
RLP49 |
Location: |
Chr.19:49527579-49543638 on Build GRCh38 |
Assay Gene Location: | Within Intron 3 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
RCN3 | NM_020650.2 | NP_065701.2 | ||
XM_005259089.3 | XP_005259146.1 | |||
XM_011527143.1 | XP_011525445.1 | |||
XM_017027023.1 | XP_016882512.1 | |||
AF183423.1 | AAG09692.1 | |||
AY195859.1 | AAO43054.1 | |||
AY358423.1 | AAQ88789.1 | |||
BC013436.1 | AAH13436.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv9739 | Chr.19:47901840 - 50143063 on Build GRCh38 | Gain+Loss | C19orf68 MIR6799 FLT3LG SNAR-D SPHK2 LOC105447645 GYS1 ZNF114 PPFIA3 SNAR-C3 PLA2G4C-AS1 ATF5 RCN3 IZUMO1 DKKL1 SNAR-A2 SNRNP70 FTL SNAR-C2 SNAR-B2 RASIP1 IRF3 LHB FCGRT MIR4324 SNAR-A14 SNAR-A10 CGB7 SLC17A7 LIG1 PLEKHA4 NUCB1-AS1 SNAR-A3 CGB5 TMEM143 MED25 AP2A1 SNAR-A13 TBC1D17 ZNF473 NTN5 PTOV1 KCNJ14 CCDC155 RRAS ADM5 DBP SNORD34 CABP5 SNAR-A5 PIH1D1 BSPH1 KCNA7 FGF21 LOC100287477 CARD8 AKT1S1 TSKS SNAR-G2 FUT2 MIR6798 SCAF1 NTF4 IL4I1 C19orf73 SNAR-C1 SNAR-B1 SNAR-A7 MIR150 FUZ CGB8 SNORD32A TULP2 CGB2 MIR6800 LOC101928295 SNAR-A8 RPS11 FLJ26850 SNORD35A GRIN2D KDELR1 CCDC114 SNAR-A9 NUP62 RPL13A BAX MIR4750 PTOV1-AS2 PRRG2 LIN7B CGB1 SNAR-A12 SEC1P ELSPBP1 RPL18 SPACA4 PPP1R15A SYNGR4 SNORD33 FAM83E HRC BCAT2 BCL2L12 SULT2B1 SNAR-A1 CPT1C SNAR-C5 PTH2 SLC6A16 PTOV1-AS1 GRWD1 CGB3 PLA2G4C TEAD2 EMP3 LOC105372430 GFY LOC101059948 CA11 SNAR-A4 CARD8-AS1 RUVBL2 TRPM4 SIGLEC11 FUT1 DHDH CYTH2 NUCB1 SIGLEC16 CD37 MIR5088 HSD17B14 SNAR-G1 SNORD35B MIR4749 SNAR-C4 NOSIP PRR12 SNAR-A11 PRMT1 MAMSTR VRK3 LMTK3 PNKP SNAR-A6 MIR4751 ALDH16A1 |
nsv833863 | Chr.19:49479177 - 49629716 on Build GRCh38 | Loss | SNORD35B NOSIP PRRG2 PRR12 FLT3LG RPS11 SNORD35A SNORD34 FCGRT SNORD33 MIR150 RCN3 RPL13A SNORD32A |
nsv833862 | Chr.19:49448789 - 49570676 on Build GRCh38 | Loss | SNORD35B NOSIP FLT3LG RPS11 SNORD35A SNORD34 FCGRT SNORD33 PIH1D1 MIR150 RCN3 RPL13A SNORD32A ALDH16A1 |
nsv1160655 | Chr.19:49489110 - 49841830 on Build GRCh38 | Deletion | PTOV1-AS1 RRAS MIR6800 MIR6799 RPS11 ADM5 SNORD35A SNORD34 RCN3 RPL13A MIR5088 TSKS SNORD35B NOSIP PRRG2 PRR12 IRF3 SCAF1 PRMT1 FCGRT SNORD33 MIR150 BCL2L12 CPT1C MED25 AP2A1 FUZ SNORD32A |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |