Assay Details
Target Gene Details
Entrez Gene ID: | 6510 |
Gene Name: | solute carrier family 1 member 5 |
Gene Aliases: |
AAAT, ASCT2, ATBO, M7V1, M7VS1, R16, RDRC |
Location: |
Chr.19:46759685-46788622 on Build GRCh38 |
Assay Gene Location: | Within Intron 10 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SLC1A5 | XM_005259167.4 | XP_005259224.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv3644536 | Chr.19:46768258 - 46772221 on Build GRCh38 | Loss | SLC1A5 |
nsv833850 | Chr.19:46703285 - 46867053 on Build GRCh38 | Loss | MIR320E STRN4 LOC107987269 PRKD2 ARHGAP35 FKRP AP2S1 SLC1A5 SNAR-E |
dgv3608n100 | Chr.19:46757741 - 46865807 on Build GRCh38 | Gain | ARHGAP35 FKRP AP2S1 SLC1A5 SNAR-E |
More Information
Additional Information:
For this assay, SNP(s) [rs72477169] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |