Assay Details
Target Gene Details
Entrez Gene ID: | 57333 |
Gene Name: | reticulocalbin 3 |
Gene Aliases: |
RLP49 |
Location: |
Chr.19:49527579-49543638 on Build GRCh38 |
Assay Gene Location: | Within Intron 3 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
RCN3 | NM_020650.2 | NP_065701.2 | ||
XM_005259089.3 | XP_005259146.1 | |||
XM_011527143.1 | XP_011525445.1 | |||
XM_017027023.1 | XP_016882512.1 | |||
AF183423.1 | AAG09692.1 | |||
AY195859.1 | AAO43054.1 | |||
AY358423.1 | AAQ88789.1 | |||
BC013436.1 | AAH13436.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv9739 | Chr.19:47901840 - 50143063 on Build GRCh38 | Gain+Loss | CGB7 CCDC155 SNAR-A11 LIN7B LOC101928295 SIGLEC16 RPS11 SIGLEC11 FLT3LG NTN5 PTH2 NUP62 FLJ26850 CGB2 MIR4750 SNAR-C5 SNAR-A2 SNAR-A8 PTOV1-AS1 SNAR-C3 SNAR-C1 MIR4324 ZNF114 SNAR-A9 FAM83E IZUMO1 TULP2 RPL13A GFY CCDC114 MED25 SNAR-A10 FUZ SNAR-C2 LHB CGB3 SNORD32A PRRG2 MIR4751 MIR6799 PNKP IRF3 CARD8-AS1 SNAR-A6 SNAR-A4 SNAR-A5 KCNA7 FUT1 NUCB1 AKT1S1 C19orf68 NOSIP NUCB1-AS1 ELSPBP1 CGB5 TEAD2 CGB1 SYNGR4 CPT1C PTOV1 FGF21 PLA2G4C BSPH1 SLC17A7 RUVBL2 CYTH2 MIR6798 SNAR-A3 MAMSTR PPP1R15A HSD17B14 SNAR-G2 SULT2B1 LIG1 LOC105372430 PPFIA3 EMP3 LOC101059948 AP2A1 IL4I1 PRR12 TMEM143 SNAR-C4 SNORD35B MIR150 FTL SNAR-A13 BAX NTF4 ALDH16A1 GRWD1 GYS1 CABP5 CARD8 SNAR-A7 RCN3 VRK3 KCNJ14 RRAS RASIP1 SCAF1 PTOV1-AS2 SPHK2 SNAR-A14 DHDH ADM5 BCL2L12 LOC100287477 PLA2G4C-AS1 GRIN2D SNAR-B1 SNAR-A12 DBP DKKL1 MIR6800 HRC SPACA4 SNORD33 SNORD34 PLEKHA4 BCAT2 C19orf73 SNAR-B2 SEC1P SNORD35A SNAR-A1 ZNF473 SNAR-G1 SNRNP70 TSKS SLC6A16 PRMT1 TRPM4 CGB8 RPL18 LMTK3 MIR4749 FCGRT TBC1D17 KDELR1 LOC105447645 MIR5088 PIH1D1 FUT2 SNAR-D CA11 CD37 ATF5 |
nsv833863 | Chr.19:49479177 - 49629716 on Build GRCh38 | Loss | NOSIP SNORD32A PRRG2 PRR12 SNORD35B MIR150 RCN3 SNORD33 SNORD34 RPS11 FCGRT FLT3LG SNORD35A RPL13A |
nsv833862 | Chr.19:49448789 - 49570676 on Build GRCh38 | Loss | NOSIP SNORD32A SNORD35B MIR150 RCN3 SNORD33 SNORD34 RPS11 FCGRT FLT3LG PIH1D1 SNORD35A ALDH16A1 RPL13A |
nsv1160655 | Chr.19:49489110 - 49841830 on Build GRCh38 | Deletion | FUZ SNORD32A AP2A1 PRRG2 MIR6799 PRR12 MIR6800 SNORD35B MIR150 SNORD33 SNORD34 RPS11 IRF3 SNORD35A TSKS PRMT1 NOSIP PTOV1-AS1 CPT1C RCN3 RRAS FCGRT SCAF1 MIR5088 RPL13A ADM5 BCL2L12 MED25 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |