Assay Details
Target Gene Details
Entrez Gene ID: | 124935 |
Gene Name: | solute carrier family 43 member 2 |
Gene Aliases: |
LAT4 |
Location: |
Chr.17:1569254-1630014 on Build GRCh38 |
Assay Gene Location: | Within Exon 18 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SLC43A2 | NM_001284498.1 | 15 | 5843 | NP_001271427.1 |
NM_001284499.1 | 10 | 5284 | NP_001271428.1 | |
NM_001321364.1 | 15 | 5641 | NP_001308293.1 | |
NM_001321365.1 | 15 | 5810 | NP_001308294.1 | |
NM_152346.2 | 14 | 5629 | NP_689559.1 | |
AK056769.1 | 1 | 721 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv833334 | Chr.17:1411327 - 1582381 on Build GRCh38 | Loss | SLC43A2 PITPNA-AS1 MYO1C PITPNA CRK INPP5K |
nsv1945 | Chr.17:1560608 - 1589052 on Build GRCh38 | Insertion | SLC43A2 PITPNA |
esv1004030 | Chr.17:1566596 - 1574887 on Build GRCh38 | Deletion | SLC43A2 |
nsv457635 | Chr.17:1554545 - 1638896 on Build GRCh38 | Gain | SLC43A2 PITPNA SCARF1 |
More Information
Additional Information:
For this assay, SNP(s) [rs112833601] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Exonic DGV Variation |