Assay Details
Target Gene Details
Entrez Gene ID: | 1973 |
Gene Name: | eukaryotic translation initiation factor 4A1 |
Gene Aliases: |
DDX2A, EIF-4A, EIF4A, eIF-4A-I, eIF4A-I |
Location: |
Chr.17:7572706-7579006 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
EIF4A1 | NM_001204510.1 | NP_001191439.1 | ||
NM_001416.3 | NP_001407.1 | |||
AK130082.1 | ||||
AK289453.1 | ||||
AK291971.1 | ||||
AK296664.1 | ||||
AK297916.1 | ||||
AK303222.1 | ||||
AK303599.1 | ||||
AK309274.1 | ||||
AK312630.1 | ||||
BC009585.1 | AAH09585.1 | |||
BC073752.1 | AAH73752.1 | |||
BG284868.1 | ||||
BT019880.1 | AAV38683.1 | |||
BT019881.1 | AAV38684.1 | |||
D13748.1 | BAA02897.1 |
Target Gene Details
Entrez Gene ID: | 100533955 |
Gene Name: | SENP3-EIF4A1 readthrough (NMD candidate) |
Gene Aliases: |
- |
Location: |
Chr.17:7561992-7579006 on Build GRCh38 |
Assay Gene Location: | Within Intron 12 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SENP3-EIF4A1 | NR_037926.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2422288 | Chr.17:6789933 - 7646709 on Build GRCh38 | Deletion | TMEM256 FGF11 SNORA67 ALOX12P2 EIF5A CLDN7 YBX2 ASGR2 TNFSF13 TNK1 SENP3 ELP5 SHBG CHRNB1 CTDNEP1 CD68 TMEM256-PLSCR3 RNASEK-C17orf49 ACAP1 ALOX12-AS1 SNORD10 GPS2 MIR497HG SLC2A4 LOC107983988 C17orf74 MPDU1 DVL2 POLR2A ACADVL SNORA48 SPEM1 MIR195 TMEM102 PHF23 DLG4 C17orf49 GABARAP RNASEK FXR2 EIF4A1 SENP3-EIF4A1 TEKT1 ATP1B2 FBXO39 CLEC10A BCL6B TNFSF12 ZBTB4 LOC100996842 SLC35G6 SLC16A11 KCTD11 TNFSF12-TNFSF13 MIR324 NLGN2 NEURL4 SLC16A13 SAT2 ALOX12 PLSCR3 ASGR1 SOX15 TMEM95 MIR497 |
nsv574322 | Chr.17:7010333 - 7689462 on Build GRCh38 | Loss | TMEM256 WRAP53 FGF11 SNORA67 EIF5A CLDN7 YBX2 ASGR2 TNFSF13 TNK1 SENP3 ELP5 SHBG CHRNB1 CTDNEP1 CD68 TMEM256-PLSCR3 RNASEK-C17orf49 ACAP1 ALOX12-AS1 SNORD10 GPS2 MIR497HG SLC2A4 LOC107983988 C17orf74 MPDU1 DVL2 POLR2A ACADVL SNORA48 SPEM1 MIR195 TMEM102 PHF23 DLG4 C17orf49 GABARAP RNASEK FXR2 EIF4A1 SENP3-EIF4A1 ATP1B2 CLEC10A BCL6B TNFSF12 TP53 ZBTB4 LOC100996842 SLC35G6 SLC16A11 KCTD11 TNFSF12-TNFSF13 MIR324 NLGN2 NEURL4 SLC16A13 SAT2 ALOX12 PLSCR3 ASGR1 SOX15 TMEM95 MIR497 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |