Assay Details
Target Gene Details
Entrez Gene ID: | 9351 |
Gene Name: | SLC9A3 regulator 2 |
Gene Aliases: |
E3KARP, NHE3RF2, NHERF-2, NHERF2, OCTS2, SIP-1, SIP1, TKA-1 |
Location: |
Chr.16:2026868-2039026 on Build GRCh38 |
Assay Gene Location: | Within Exon 4 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SLC9A3R2 | NM_001130012.2 | NP_001123484.1 | ||
NM_004785.5 | NP_004776.3 | |||
XM_005255702.4 | 1 | 193 | XP_005255759.1 | |
XM_017023894.1 | 1 | 191 | XP_016879383.1 | |
XM_017023895.1 | XP_016879384.1 | |||
AF004900.1 | AAC63061.1 | |||
AF035771.1 | AAC52090.1 | |||
BC014513.1 | AAH14513.2 | |||
BC069014.1 | AAH69014.1 | |||
BC106001.1 | AAI06002.1 | |||
DB495688.2 | ||||
U82108.1 | AAB53042.1 | |||
Z50150.1 | CAA90511.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2422427 | Chr.16:10001 - 2723164 on Build GRCh38 | Duplication | SSTR5-AS1 ZNF598 RAB11FIP3 C1QTNF8 TPSB2 PRR35 ARHGDIG HN1L C16orf59 ERVK13-1 CACNA1H IGFALS POLR3K BRICD5 LINC00235 CAPN15 GNPTG MSLN LMF1 MIR6859-4 NME3 HBQ1 FAM234A RPL3L LUC7L LOC105371184 MCRIP2 NPRL3 SNORA78 FAM173A CLCN7 TSR3 PRR25 PTX4 SLC9A3R2 MIR6767 CRAMP1 TMEM8A C16orf91 SOX8 LMF1-AS1 RPL23AP5 SPSB3 PIGQ ABCA3 PGP TMEM204 RHBDF1 TRAF7 RNPS1 SNORA64 GNG13 SSTR5 RPS2 RAB26 MRPS34 BAIAP3 CCNF KCTD5 WFIKKN1 PDIA2 NARFL NUBP2 LOC105371045 MAPK8IP3 MIR940 HBA1 TBC1D24 JMJD8 MIR3177 ABCA17P LOC729652 MIR4516 NOXO1 MIR3176 LOC105371047 E4F1 LOC652276 MPG HAGH HBM LOC100134368 TPSAB1 NTHL1 AMDHD2 SNORA10 UNKL PDPK1 LOC107987233 NPW SNHG19 MIR662 HBA2 TSC2 RGS11 NTN3 RPUSD1 CCDC78 CHTF18 HBZ TPSG1 HS3ST6 MIR3677 DDX11L10 EME2 UBE2I IFT140 MIR6768 MIR5587 NME4 LOC105371038 METTL26 SYNGR3 CCDC154 RNF151 LOC100287175 PKD1 SNRNP25 RHBDL1 DECR2 RHOT2 WDR24 MLST8 FAHD1 TELO2 SNHG9 TBL3 MIR1225 LOC107984876 PRSS29P MIR4717 CASKIN1 GFER LOC105371049 METRN PRSS27 MEIOB NDUFB10 TPSD1 ECI1 STUB1 ATP6V0C LINC00254 SNORD60 WASIR2 FBXL16 MIR6511B1 DNASE1L2 MSRB1 LOC105371046 MIR3180-5 RAB40C LOC106660606 LOC101929280 AXIN1 CEMP1 FLJ42627 MIR3178 MRPL28 WDR90 HAGHL NHLRC4 |
nsv521569 | Chr.16:1971892 - 2035996 on Build GRCh38 | Loss | ZNF598 NPW TBL3 SYNGR3 SLC9A3R2 GFER NOXO1 |
dgv4858n54 | Chr.16:1955562 - 2038584 on Build GRCh38 | Loss | ZNF598 SNORA10 SNORA78 NPW SNHG9 TBL3 SYNGR3 RNF151 SLC9A3R2 GFER SNORA64 NDUFB10 RPS2 NOXO1 |
nsv952901 | Chr.16:1888800 - 2135899 on Build GRCh38 | Deletion | ZNF598 HS3ST6 RPL3L NTHL1 MIR6511B1 SNORA10 MSRB1 SNORA78 NPW SNHG9 TBL3 MIR1225 SYNGR3 RNF151 SLC9A3R2 TSC2 GFER LOC105371049 SNORA64 PKD1 NDUFB10 RPS2 MIR4516 NOXO1 |
nsv1160329 | Chr.16:1961727 - 2128574 on Build GRCh38 | Deletion | ZNF598 NTHL1 MIR6511B1 SNORA10 SNORA78 NPW SNHG9 TBL3 MIR1225 SYNGR3 RNF151 SLC9A3R2 TSC2 GFER LOC105371049 SNORA64 PKD1 NDUFB10 RPS2 NOXO1 |
dgv336n27 | Chr.16:1965120 - 2038584 on Build GRCh38 | Loss | SNORA78 ZNF598 NPW SNHG9 TBL3 SYNGR3 RNF151 SLC9A3R2 GFER NOXO1 |
nsv571189 | Chr.16:2004154 - 2037561 on Build GRCh38 | Loss | ZNF598 NPW SLC9A3R2 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |