Assay Details
Target Gene Details
Entrez Gene ID: | 29855 |
Gene Name: | ubinuclein 1 |
Gene Aliases: |
VT, VT4 |
Location: |
Chr.16:4846665-4882401 on Build GRCh38 |
Assay Gene Location: | Within Intron 7 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
UBN1 | NM_001079514.2 | NP_001072982.1 | ||
NM_001288656.1 | NP_001275585.1 | |||
XM_005255277.3 | XP_005255334.1 | |||
XM_005255278.3 | XP_005255335.1 | |||
XM_005255279.3 | XP_005255336.1 | |||
XM_011522465.1 | XP_011520767.1 | |||
XM_011522466.2 | XP_011520768.1 | |||
XM_011522467.1 | XP_011520769.1 | |||
XM_017023189.1 | XP_016878678.1 | |||
XM_017023190.1 | XP_016878679.1 | |||
XM_017023191.1 | XP_016878680.1 | |||
XM_017023192.1 | XP_016878681.1 | |||
AF108460.1 | AAF31755.1 | |||
AF108461.1 | AAF31756.1 | |||
AK300131.1 | ||||
U19346.1 | AAA64188.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv25186 | Chr.16:4858500 - 5142800 on Build GRCh38 | Gain | NAGPA-AS1 EEF2KMT C16orf89 NAGPA ALG1 UBN1 SEC14L5 PPL |
esv2422516 | Chr.16:4775920 - 5160979 on Build GRCh38 | Deletion | SMIM22 NAGPA-AS1 EEF2KMT SEPT12 C16orf89 NAGPA GLYR1 ALG1 UBN1 ROGDI SEC14L5 PPL |
nsv510674 | Chr.16:4832446 - 4882731 on Build GRCh38 | Deletion | GLYR1 UBN1 PPL |
nsv1046986 | Chr.16:4049000 - 5555721 on Build GRCh38 | Gain | SMIM22 ADCY9 DNAJA3 ANKS3 EEF2KMT SEPT12 NMRAL1 C16orf89 C16orf71 NUDT16L1 UBALD1 VASN ZNF500 RBFOX1 ROGDI PAM16 SEC14L5 HMOX2 CDIP1 CORO7-PAM16 NAGPA-AS1 CORO7 NAGPA LOC105371063 PPL GLIS2-AS1 C16orf96 TFAP4 SRL MIR6769A GLIS2 MGRN1 GLYR1 ALG1 UBN1 LINC01569 |
esv3637707 | Chr.16:4823818 - 4874308 on Build GRCh38 | Gain | GLYR1 UBN1 |
nsv1720 | Chr.16:4854258 - 4900577 on Build GRCh38 | Deletion | UBN1 PPL |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |