Assay Details
Target Gene Details
Entrez Gene ID: | 23359 |
Gene Name: | family with sequence similarity 189 member A1 |
Gene Aliases: |
TMEM228 |
Location: |
Chr.15:29120252-29570723 on Build GRCh38 |
Assay Gene Location: | Within Intron 9 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
FAM189A1 | NM_015307.1 | NP_056122.1 | ||
XM_011521407.2 | XP_011519709.1 | |||
AB011146.1 | BAA25500.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv1040778 | Chr.15:28689598 - 30515727 on Build GRCh38 | Loss | PDCD6IPP2 GOLGA8R APBA2 LOC105370751 LOC100289656 GOLGA8J FAM189A1 GOLGA6L7P NSMCE3 TJP1 LOC100130111 LOC105370746 DKFZP434L187 WHAMMP2 ULK4P3 GOLGA8M CHRFAM7A GOLGA8T LOC107984752 LOC101060569 |
nsv515798 | Chr.15:29068198 - 29146274 on Build GRCh38 | Gain+Loss | APBA2 FAM189A1 |
nsv471232 | Chr.15:29087561 - 29139979 on Build GRCh38 | Loss | APBA2 FAM189A1 |
nsv527255 | Chr.15:28754022 - 30074044 on Build GRCh38 | Gain | PDCD6IPP2 APBA2 LOC100289656 WHAMMP2 FAM189A1 GOLGA6L7P NSMCE3 LOC107984752 TJP1 LOC100130111 |
esv2751526 | Chr.15:28724519 - 30687025 on Build GRCh38 | Loss | PDCD6IPP2 APBA2 LOC105370751 LOC100289656 FAM189A1 LOC100130111 DKFZP434L187 LOC100996413 WHAMMP2 GOLGA8H GOLGA8R ARHGAP11B GOLGA8J GOLGA6L7P NSMCE3 LOC100288637 TJP1 LOC105370746 LOC101927579 ULK4P3 CHRFAM7A ULK4P2 GOLGA8T LOC107984752 LOC101060569 |
nsv1039798 | Chr.15:28724126 - 30158154 on Build GRCh38 | Gain | PDCD6IPP2 APBA2 LOC100289656 GOLGA8J FAM189A1 GOLGA6L7P NSMCE3 TJP1 LOC100130111 WHAMMP2 ULK4P3 GOLGA8T LOC107984752 |
nsv568675 | Chr.15:29035149 - 29916451 on Build GRCh38 | Gain | APBA2 FAM189A1 NSMCE3 TJP1 LOC100130111 |
nsv524362 | Chr.15:29089598 - 29155854 on Build GRCh38 | Loss | APBA2 FAM189A1 |