Assay Details
Target Gene Details
Entrez Gene ID: | 22909 |
Gene Name: | FANCD2/FANCI-associated nuclease 1 |
Gene Aliases: |
KIAA1018, KMIN, MTMR15, hFAN1 |
Location: |
Chr.15:30903695-30943108 on Build GRCh38 |
Assay Gene Location: | Within Exon 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
FAN1 | XM_005254234.4 | 1 | 72 | XP_005254291.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv832951 | Chr.15:30839036 - 31012266 on Build GRCh38 | Loss | FAN1 MTMR10 TRPM1 |
nsv525795 | Chr.15:30644082 - 31032328 on Build GRCh38 | Gain | HERC2P10 LOC107984025 LOC101930434 FAN1 MTMR10 TRPM1 LOC100288637 |
esv3569376 | Chr.15:30781533 - 30987140 on Build GRCh38 | Gain | HERC2P10 LOC107984025 LOC101930434 FAN1 MTMR10 |
esv33507 | Chr.15:30891121 - 31178820 on Build GRCh38 | Loss | FAN1 MTMR10 TRPM1 MIR211 |
nsv521842 | Chr.15:30848497 - 30980467 on Build GRCh38 | Gain | FAN1 MTMR10 |
nsv1046874 | Chr.15:30715930 - 31002451 on Build GRCh38 | Gain | HERC2P10 LOC107984025 LOC101930434 FAN1 MTMR10 TRPM1 LOC100288637 |
esv3636036 | Chr.15:30818302 - 31038636 on Build GRCh38 | Gain | HERC2P10 FAN1 MTMR10 TRPM1 |
More Information
Additional Information:
For this assay, SNP(s) [rs141762740] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Exonic DGV Variation |