Assay Details
Target Gene Details
Entrez Gene ID: | 6297 |
Gene Name: | spalt like transcription factor 2 |
Gene Aliases: |
COLB, HSAL2, Sal-2, ZNF795, p150(Sal2) |
Location: |
Chr.14:21521080-21537216 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SALL2 | NM_001291446.1 | NP_001278375.1 | ||
NM_005407.2 | NP_005398.2 | |||
NR_111966.1 | ||||
XM_011537064.1 | XP_011535366.1 | |||
AB002358.2 | ||||
AK001276.1 | ||||
AK293574.1 | ||||
AK299931.1 | ||||
BC136528.1 | ||||
BC136529.1 | ||||
DC306696.1 | ||||
DT216192.1 | ||||
X98834.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv3633718 | Chr.14:21495207 - 21527525 on Build GRCh38 | Gain | TOX4 METTL3 SALL2 |
esv2660046 | Chr.14:21524711 - 21527358 on Build GRCh38 | Deletion | SALL2 |
esv2422459 | Chr.14:21463465 - 21701280 on Build GRCh38 | Duplication | TOX4 OR4E2 OR10G3 METTL3 SALL2 OR10G2 OR4E1 RAB2B |
esv3633716 | Chr.14:21455908 - 21564274 on Build GRCh38 | Gain | TOX4 METTL3 SALL2 RAB2B |
nsv522850 | Chr.14:21521707 - 21529974 on Build GRCh38 | Gain | SALL2 |
More Information
Additional Information:
For this assay, SNP(s) [rs116734335] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |