Assay Details
Target Gene Details
Entrez Gene ID: | 960 |
Gene Name: | CD44 molecule (Indian blood group) |
Gene Aliases: |
CDW44, CSPG8, ECMR-III, HCELL, HUTCH-I, IN, LHR, MC56, MDU2, MDU3, MIC4, Pgp1 |
Location: |
Chr.11:35138870-35232402 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
esv2759818 | Chr.11:35008386 - 35217031 on Build GRCh38 | Loss | CD44 LOC100507144 |
nsv1042014 | Chr.11:34919190 - 37195907 on Build GRCh38 | Loss | MIR1343 LOC101928510 PAMR1 RAG1 COMMD9 C11orf74 SLC1A2 TRIM44 RAG2 MIR3973 PRR5L CD44 LDLRAD3 PDHX LOC100507144 TRAF6 FJX1 |
esv3625922 | Chr.11:35148319 - 35190916 on Build GRCh38 | Loss | CD44 |
nsv951602 | Chr.11:35160554 - 35175653 on Build GRCh38 | Duplication | CD44 |
nsv508623 | Chr.11:35073386 - 35181816 on Build GRCh38 | Deletion | CD44 LOC100507144 |
More Information
Additional Information:
For this assay, SNP(s) [rs74675059] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |