Assay Details
Target Gene Details
Entrez Gene ID: | 338707 |
Gene Name: | beta-1,4-N-acetyl-galactosaminyltransferase 4 |
Gene Aliases: |
- |
Location: |
Chr.11:369773-382117 on Build GRCh38 |
Assay Gene Location: | Within Intron 15 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
B4GALNT4 | NM_178537.4 | NP_848632.2 | ||
XM_017017654.1 | XP_016873143.1 | |||
AB089939.1 | BAD06471.1 | |||
AK057774.1 | BAB71566.1 | |||
BC131528.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv527327 | Chr.11:295343 - 620599 on Build GRCh38 | Loss | IFITM2 LRRC56 SIGIRR LMNTD2 LOC101059906 IRF7 RNH1 ANO9 IFITM3 PTDSS2 PKP3 IFITM5 MIR210HG PGGHG RASSF7 HRAS PHRF1 B4GALNT4 CDHR5 LOC143666 MIR210 IFITM1 |
nsv552776 | Chr.11:366710 - 432436 on Build GRCh38 | Loss | SIGIRR PKP3 ANO9 B4GALNT4 |
esv28392 | Chr.11:363975 - 403432 on Build GRCh38 | Gain+Loss | PKP3 B4GALNT4 |
nsv951268 | Chr.11:368601 - 503700 on Build GRCh38 | Deletion | SIGIRR PKP3 RNH1 ANO9 B4GALNT4 PTDSS2 |
nsv552770 | Chr.11:356090 - 444628 on Build GRCh38 | Gain | SIGIRR PKP3 ANO9 B4GALNT4 |
dgv1505n54 | Chr.11:198510 - 470331 on Build GRCh38 | Gain | IFITM2 SIGIRR ODF3 ANO9 IFITM3 PTDSS2 PSMD13 SIRT3 PKP3 IFITM5 NLRP6 PGGHG RIC8A BET1L MIR6743 B4GALNT4 IFITM1 |
nsv1159790 | Chr.11:340219 - 491334 on Build GRCh38 | Deletion | SIGIRR PKP3 ANO9 B4GALNT4 PTDSS2 |
dgv182e199 | Chr.11:349830 - 943372 on Build GRCh38 | Deletion | TMEM80 PNPLA2 SCT SIGIRR LMNTD2 LOC101059906 RNH1 ANO9 RPLP2 CEND1 CHID1 TALDO1 PTDSS2 PIDD1 SNORA52 RASSF7 CD151 B4GALNT4 PANO1 LOC143666 SLC25A22 LRRC56 IRF7 DEAF1 DRD4 CRACR2B POLR2L LOC171391 PKP3 MIR210HG HRAS AP2A2 PHRF1 PDDC1 CDHR5 MIR210 TSPAN4 EPS8L2 |
dgv1507n54 | Chr.11:368778 - 382912 on Build GRCh38 | Loss | B4GALNT4 |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |