Assay Details
Target Gene Details
Entrez Gene ID: | 283120 |
Gene Name: | H19, imprinted maternally expressed transcript (non-protein coding) |
Gene Aliases: |
ASM, ASM1, BWS, D11S813E, LINC00008, NCRNA00008, WT2 |
Location: |
Chr.11:1995176-2001466 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 4 - Exon 4 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
H19 | NR_002196.2 | |||
NR_131223.1 | ||||
NR_131224.1 | ||||
AK056774.1 | ||||
AK092486.1 | ||||
AK123560.1 | ||||
AK311497.1 | ||||
BE730693.1 | ||||
CN424819.1 |
Target Gene Details
Entrez Gene ID: | 103344718 |
Gene Name: | H19 opposite tumor suppressor |
Gene Aliases: |
- |
Location: |
Chr.11:1992408-1996294 on Build GRCh38 |
Assay Gene Location: | Within Exon 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
HOTS | NM_001293171.2 | 1 | 3731 | NP_001280100.1 |
Target Gene Details
Entrez Gene ID: | 6150 |
Gene Name: | mitochondrial ribosomal protein L23 |
Gene Aliases: |
L23MRP, RPL23, RPL23L |
Location: |
Chr.11:1947272-2013176 on Build GRCh38 |
Assay Gene Location: |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
MRPL23 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv522320 | Chr.11:1835882 - 1996938 on Build GRCh38 | Loss | LINC01150 TNNT3 TNNI2 LINC01219 SNORD131 LSP1 MRPL23-AS1 SYT8 HOTS MIR4298 MIR675 MIR7847 H19 MRPL23 |
nsv1047474 | Chr.11:1803515 - 2043381 on Build GRCh38 | Gain | LINC01150 TNNT3 TNNI2 LINC01219 SNORD131 LSP1 MRPL23-AS1 SYT8 HOTS MIR4298 MIR675 MIR7847 H19 MRPL23 |
dgv1016n100 | Chr.11:1946041 - 2043381 on Build GRCh38 | Gain | LINC01219 SNORD131 HOTS MIR675 MRPL23-AS1 H19 MRPL23 |
nsv553064 | Chr.11:1943082 - 2001669 on Build GRCh38 | Loss | LINC01219 SNORD131 HOTS MIR675 MRPL23-AS1 H19 MRPL23 |
nsv469926 | Chr.11:1813024 - 2036416 on Build GRCh38 | Loss | LINC01150 TNNT3 TNNI2 LINC01219 SNORD131 LSP1 MRPL23-AS1 SYT8 HOTS MIR4298 MIR675 MIR7847 H19 MRPL23 |
nsv951283 | Chr.11:1913571 - 2040070 on Build GRCh38 | Deletion | TNNT3 LINC01219 SNORD131 HOTS MIR675 MRPL23-AS1 H19 MRPL23 |
esv29980 | Chr.11:1820597 - 2097889 on Build GRCh38 | Loss | LINC01150 TNNT3 TNNI2 LINC01219 SNORD131 LSP1 MRPL23-AS1 SYT8 HOTS MIR4298 MIR675 MIR7847 H19 MRPL23 |
nsv553047 | Chr.11:1733170 - 2418537 on Build GRCh38 | Gain | TH TNNT3 TNNI2 LINC01219 IFITM10 LSP1 TRPM5 INS-IGF2 CD81 HOTS MIR4298 ASCL2 CD81-AS1 H19 MRPL23 MIR483 CTSD LINC01150 SNORD131 TSPAN32 TSSC4 MRPL23-AS1 INS MIR4686 IGF2 SYT8 IGF2-AS MIR675 MIR7847 C11orf21 |