Assay Details
Target Gene Details
Entrez Gene ID: | 55326 |
Gene Name: | 1-acylglycerol-3-phosphate O-acyltransferase 5 |
Gene Aliases: |
1AGPAT5, LPAATE |
Location: |
Chr.8:6708357-6761503 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
AGPAT5 | NM_018361.3 | NP_060831.2 | ||
XM_011534751.2 | XP_011533053.1 | |||
AF375789.1 | AAK54809.1 | |||
AK002072.1 | BAA92069.1 | |||
AK310545.1 | ||||
AL136587.1 | CAB66522.1 | |||
BC023550.2 | AAH23550.1 | |||
BC068519.1 | AAH68519.1 | |||
BC080537.1 | AAH80537.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv1021684 | Chr.8:6492570 - 6951933 on Build GRCh38 | Loss | MIR4659A MIR8055 XKR5 AGPAT5 ANGPT2 DEFA6 MCPH1 GS1-24F4.2 MCPH1-AS1 DEFA8P DEFB1 DEFA4 MIR4659B |
nsv610004 | Chr.8:6544845 - 6915391 on Build GRCh38 | Gain | MIR4659A MIR8055 MCPH1 XKR5 GS1-24F4.2 MCPH1-AS1 AGPAT5 ANGPT2 DEFB1 MIR4659B |
nsv1025976 | Chr.8:6615427 - 6829450 on Build GRCh38 | Loss | MIR4659A MIR8055 MCPH1 XKR5 MCPH1-AS1 AGPAT5 MIR4659B |
nsv6059 | Chr.8:6693878 - 6726740 on Build GRCh38 | Insertion | MCPH1-AS1 AGPAT5 |
esv2422383 | Chr.8:6504868 - 6924071 on Build GRCh38 | Duplication | MIR4659A MIR8055 MCPH1 XKR5 GS1-24F4.2 MCPH1-AS1 AGPAT5 ANGPT2 DEFB1 MIR4659B |
nsv831220 | Chr.8:6670324 - 6870969 on Build GRCh38 | Gain | MIR4659A XKR5 GS1-24F4.2 MCPH1-AS1 AGPAT5 DEFB1 MIR4659B |
nsv610006 | Chr.8:6710680 - 7063882 on Build GRCh38 | Gain | MIR4659A DEFA5 XKR5 DEFA1 AGPAT5 DEFA11P DEFA10P DEFA1B DEFA6 DEFA3 DEFA9P GS1-24F4.2 DEFT1P2 DEFA7P DEFA8P DEFB1 DEFA4 MIR4659B DEFT1P |
nsv1031577 | Chr.8:6712833 - 8008628 on Build GRCh38 | Gain | DEFB103A XKR5 AGPAT5 DEFB106B DEFA11P DEFB4B LINC00965 DEFA6 SPAG11A LOC101929400 ZNF705B DEFB103B DEFA4 SPAG11B MIR4659A OR7E125P DEFA5 FAM90A7P DEFA1B DEFB4A PRR23D1 DEFA3 LOC101928095 FAM90A10P GS1-24F4.2 DEFA7P USP17L1 FAM66E DEFB1 MIR4659B DEFB107B DEFB105A USP17L3 DEFB108P1 LOC107986910 OR7E154P DEFT1P2 DEFB104A DEFB109P1B ZNF705G FAM66B DEFT1P DEFB107A DEFA1 DEFA10P USP17L8 USP17L4 DEFB106A DEFA9P PRR23D2 DEFB104B DEFB105B DEFA8P |
dgv6876n100 | Chr.8:6687977 - 6812428 on Build GRCh38 | Loss | MIR4659A XKR5 MCPH1-AS1 AGPAT5 MIR4659B |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |