Assay Details
Target Gene Details
Entrez Gene ID: | 96764 |
Gene Name: | trimethylguanosine synthase 1 |
Gene Aliases: |
NCOA6IP, PIMT, PIPMT |
Location: |
Chr.8:55773232-55826445 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
TGS1 | NM_001317902.1 | NP_001304831.1 | ||
NM_024831.7 | NP_079107.6 | |||
XM_005251328.2 | XP_005251385.1 | |||
XM_006716485.2 | XP_006716548.1 | |||
XM_017014004.1 | XP_016869493.1 | |||
AF286340.1 | AAK83025.1 | |||
AF432215.1 | AAL99922.1 | |||
AK314693.1 | ||||
AY028423.1 | AAK27730.1 | |||
BM853546.1 | ||||
BX648548.1 | ||||
DB082992.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
dgv459n21 | Chr.8:55676869 - 56030580 on Build GRCh38 | Gain | LYN TGS1 TMEM68 |
nsv527341 | Chr.8:55679732 - 55895699 on Build GRCh38 | Gain | LYN TGS1 TMEM68 |
nsv611393 | Chr.8:55763923 - 55993509 on Build GRCh38 | Gain | LYN TGS1 TMEM68 |
esv2422388 | Chr.8:55707094 - 55812437 on Build GRCh38 | Duplication | TGS1 TMEM68 |
nsv611392 | Chr.8:55741553 - 55878302 on Build GRCh38 | Gain | LYN TGS1 TMEM68 |
More Information
Additional Information:
For this assay, SNP(s) [rs116537684] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |