Assay Details
Target Gene Details
Entrez Gene ID: | 6542 |
Gene Name: | solute carrier family 7 member 2 |
Gene Aliases: |
ATRC2, CAT2, HCAT2 |
Location: |
Chr.8:17494349-17570568 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
SLC7A2 | XM_017013746.1 | XP_016869235.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv610680 | Chr.8:17483518 - 17505730 on Build GRCh38 | Loss | SLC7A2 |
esv3616489 | Chr.8:17490020 - 17737549 on Build GRCh38 | Loss | MIR548V PDGFRL MTUS1 SLC7A2 |
nsv831246 | Chr.8:17430363 - 17621085 on Build GRCh38 | Gain | PDGFRL SLC7A2 |
nsv1024271 | Chr.8:17418630 - 17540313 on Build GRCh38 | Loss | SLC7A2 |
esv3616490 | Chr.8:17490532 - 17587102 on Build GRCh38 | Loss | PDGFRL SLC7A2 |
esv34867 | Chr.8:17488520 - 17725642 on Build GRCh38 | Loss | MIR548V PDGFRL MTUS1 SLC7A2 |
nsv516180 | Chr.8:17424902 - 17541640 on Build GRCh38 | Loss | SLC7A2 |
esv2759600 | Chr.8:17433671 - 17784021 on Build GRCh38 | Loss | MIR548V PDGFRL MTUS1 SLC7A2 |
More Information
Additional Information:
For this assay, SNP(s) [rs77150961] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |