Assay Details
Target Gene Details
Entrez Gene ID: | 55326 |
Gene Name: | 1-acylglycerol-3-phosphate O-acyltransferase 5 |
Gene Aliases: |
1AGPAT5, LPAATE |
Location: |
Chr.8:6708357-6761503 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
AGPAT5 | NM_018361.3 | NP_060831.2 | ||
XM_011534751.2 | XP_011533053.1 | |||
AF375789.1 | AAK54809.1 | |||
AK002072.1 | BAA92069.1 | |||
AK310545.1 | ||||
AL136587.1 | CAB66522.1 | |||
BC023550.2 | AAH23550.1 | |||
BC068519.1 | AAH68519.1 | |||
BC080537.1 | AAH80537.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv1021684 | Chr.8:6492570 - 6951933 on Build GRCh38 | Loss | DEFA6 MIR8055 MIR4659B MCPH1 XKR5 DEFA8P MIR4659A MCPH1-AS1 ANGPT2 AGPAT5 DEFA4 GS1-24F4.2 DEFB1 |
nsv610004 | Chr.8:6544845 - 6915391 on Build GRCh38 | Gain | MCPH1-AS1 ANGPT2 AGPAT5 MIR8055 MIR4659B MCPH1 XKR5 GS1-24F4.2 DEFB1 MIR4659A |
nsv1025976 | Chr.8:6615427 - 6829450 on Build GRCh38 | Loss | MCPH1-AS1 AGPAT5 MIR8055 MIR4659B MCPH1 XKR5 MIR4659A |
nsv6059 | Chr.8:6693878 - 6726740 on Build GRCh38 | Insertion | MCPH1-AS1 AGPAT5 |
esv2422383 | Chr.8:6504868 - 6924071 on Build GRCh38 | Duplication | MCPH1-AS1 ANGPT2 AGPAT5 MIR8055 MIR4659B MCPH1 XKR5 GS1-24F4.2 DEFB1 MIR4659A |
nsv831220 | Chr.8:6670324 - 6870969 on Build GRCh38 | Gain | MCPH1-AS1 AGPAT5 MIR4659B XKR5 GS1-24F4.2 DEFB1 MIR4659A |
nsv610006 | Chr.8:6710680 - 7063882 on Build GRCh38 | Gain | DEFA1B DEFA10P DEFA7P DEFA6 MIR4659B XKR5 DEFT1P DEFA5 DEFA1 DEFA8P MIR4659A DEFA9P AGPAT5 DEFA4 DEFT1P2 DEFA3 GS1-24F4.2 DEFA11P DEFB1 |
nsv1031577 | Chr.8:6712833 - 8008628 on Build GRCh38 | Gain | DEFA1B DEFB104A DEFA7P FAM90A10P XKR5 MIR4659A DEFB108P1 FAM66B OR7E154P SPAG11B DEFA3 LOC101929400 DEFB106A OR7E125P DEFB109P1B USP17L3 USP17L8 DEFB105A PRR23D2 SPAG11A GS1-24F4.2 DEFB1 DEFB103A DEFB107A ZNF705G MIR4659B DEFB105B DEFT1P DEFA5 DEFA1 FAM66E USP17L1 LINC00965 DEFB4B AGPAT5 DEFB106B DEFT1P2 DEFB103B DEFB4A ZNF705B DEFA10P DEFB107B DEFA6 LOC107986910 DEFA8P PRR23D1 DEFA9P DEFA4 LOC101928095 FAM90A7P USP17L4 DEFB104B DEFA11P |
dgv6876n100 | Chr.8:6687977 - 6812428 on Build GRCh38 | Loss | MCPH1-AS1 AGPAT5 MIR4659B XKR5 MIR4659A |
More Information
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |