Assay Details
Target Gene Details
Entrez Gene ID: | 5439 |
Gene Name: | RNA polymerase II subunit J |
Gene Aliases: |
POLR2J1, RPB11, RPB11A, RPB11m, hRPB14 |
Location: |
Chr.7:102473100-102478999 on Build GRCh38 |
Assay Gene Location: | Within Exon 3 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
POLR2J | NM_006234.4 | NP_006225.1 | ||
XM_005250452.4 | 3 | 909 | XP_005250509.1 | |
XM_017012353.1 | XP_016867842.1 | |||
AK290515.1 | ||||
BC024165.1 | AAH24165.1 | |||
BC065711.1 | AAH65711.1 | |||
BC139902.1 | ||||
BC141830.1 | ||||
BM545237.1 | ||||
BM791979.1 | ||||
L37127.1 | AAD05361.1 | |||
X82385.1 | CAA57785.1 | |||
X98433.1 | CAA67075.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv831083 | Chr.7:102340560 - 102655422 on Build GRCh38 | Loss | MIR4467 LOC100630923 PRKRIP1 LOC102724229 LRWD1 LOC107983993 SPDYE2 MIR548O RASA4B POLR2J SPDYE2B RASA4 UPK3BL POLR2J2 LOC100289561 ORAI2 POLR2J3 MIR5090 ALKBH4 SPDYE6 |
nsv482111 | Chr.7:102473103 - 102478934 on Build GRCh38 | Gain | POLR2J LRWD1 |
dgv23n31 | Chr.7:102473939 - 102777602 on Build GRCh38 | Gain | RASA4B POLR2J SPDYE2B RASA4 FBXL13 FAM185A UPK3BL POLR2J2 LOC102724229 POLR2J3 LOC107983993 SPDYE2 |
nsv608005 | Chr.7:102473640 - 102690366 on Build GRCh38 | Gain | RASA4B POLR2J SPDYE2B RASA4 UPK3BL POLR2J2 LOC102724229 POLR2J3 LOC107983993 SPDYE2 |
dgv11541n54 | Chr.7:102473462 - 102646638 on Build GRCh38 | Loss | RASA4B POLR2J RASA4 UPK3BL POLR2J2 LOC102724229 POLR2J3 LOC107983993 SPDYE2 |
nsv8192 | Chr.7:102450605 - 102692752 on Build GRCh38 | Gain | MIR4467 LOC102724229 LRWD1 LOC107983993 SPDYE2 RASA4B POLR2J SPDYE2B RASA4 UPK3BL POLR2J2 ORAI2 POLR2J3 MIR5090 ALKBH4 |
esv27624 | Chr.7:102472919 - 102691417 on Build GRCh38 | Gain+Loss | RASA4B POLR2J SPDYE2B RASA4 UPK3BL POLR2J2 LOC102724229 LRWD1 POLR2J3 LOC107983993 SPDYE2 |
nsv428182 | Chr.7:102257460 - 102735503 on Build GRCh38 | Gain | MIR4467 SH2B2 LOC100630923 PRKRIP1 LOC102724229 LRWD1 LOC107983993 SPDYE2 MIR4285 MIR548O RASA4B POLR2J SPDYE2B RASA4 FBXL13 UPK3BL POLR2J2 CUX1 LOC100289561 ORAI2 POLR2J3 MIR5090 ALKBH4 SPDYE6 |
dgv6538n100 | Chr.7:102171110 - 103063688 on Build GRCh38 | Gain | LOC100630923 FAM185A MIR548O SPDYE2B RASA4 FBXL13 POLR2J2 LRRC17 POLR2J3 NFE4 MIR4467 SH2B2 PRKRIP1 LOC102724229 LRWD1 LOC107983993 SPDYE2 MIR4285 RASA4B POLR2J UPK3BL CUX1 LOC100289561 ORAI2 MIR5090 ALKBH4 SPDYE6 |
nsv5879 | Chr.7:102450321 - 102747356 on Build GRCh38 | Deletion | MIR4467 LOC102724229 LRWD1 LOC107983993 SPDYE2 RASA4B POLR2J SPDYE2B RASA4 FBXL13 UPK3BL POLR2J2 ORAI2 POLR2J3 MIR5090 ALKBH4 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |