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Gene Symbol
POU5F1
Assay Reference Genome
Location

Chr.6:31165441 on build GRCh38
Cytoband
6p21.33
Assay ID Hs03592849_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 5460

Gene Name:

 POU class 5 homeobox 1

Gene Aliases:

 OCT3, OCT4, OTF-3, OTF3, OTF4, Oct-3, Oct-4

Location:

 Chr.6:31164337-31170693 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
POU5F1 NM_001173531.2 NP_001167002.1
NM_001285986.1 NP_001272915.1
NM_001285987.1 NP_001272916.1
NM_002701.5 NP_002692.2
NM_203289.5 NP_976034.4
AB971680.1
AB971681.1
BC117435.1
BC117437.1
DQ486514.1
DQ486515.1
DQ486516.1
DQ486517.1
GU480808.1
GU480809.1
GU480810.1
GU480811.1
GU480812.1
GU480813.1
GU480815.1
GU480816.1
GU480817.1
GU480818.1
GU480819.1
GU480820.1
GU480821.1
GU480822.1
GU480823.1
GU480824.1
GU480825.1
GU480826.1
GU480827.1
GU480828.1
GU480829.1
GU480830.1
HQ122658.1
HQ122659.1
HQ122660.1
HQ122661.1
HQ122662.1
HQ122663.1
HQ122664.1
HQ122665.1
HQ122666.1
HQ122667.1
HQ122668.1
HQ122669.1
HQ122670.1
HQ122671.1
HQ122672.1
HQ122673.1
HQ122674.1
HQ122675.1
KF880691.1
KF880692.1
KF880693.1
KJ624996.1
KJ700311.1
KM188057.1
S81255.1 AAB35990.1
Z11898.1 CAA77951.1
Z11899.1 CAA77952.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv525933 Chr.6:31113428 - 31174468 on Build GRCh38 Loss TCF19 CDSN PSORS1C3 POU5F1 PSORS1C1 CCHCR1 PSORS1C2
esv2759414 Chr.6:31060513 - 31574531 on Build GRCh38 Gain+Loss LOC100287329 HCP5 CDSN PSORS1C3 DDX39B-AS1 DDX39B POU5F1 ATP6V1G2-DDX39B MICB MCCD1 PSORS1C2 HLA-C SNORD84 TCF19 HCG26 HCG27 NFKBIL1 MIR6891 MICA LOC102725068 CCHCR1 HLA-B SNORD117 LTA ATP6V1G2 PSORS1C1 C6orf15
esv3608531 Chr.6:31163674 - 31304530 on Build GRCh38 Loss TCF19 PSORS1C3 POU5F1 HCG27 HLA-C
dgv1174e214 Chr.6:31139843 - 31176217 on Build GRCh38 Gain TCF19 PSORS1C3 POU5F1 PSORS1C1 CCHCR1
esv2731791 Chr.6:30404802 - 31346410 on Build GRCh38 Deletion SFTA2 CDSN GNL1 MIR4640 PSORS1C3 TUBB DPCR1 POU5F1 PPP1R18 PSORS1C2 HLA-C MUC21 TCF19 HLA-E C6orf136 MDC1 HCG22 IER3 PRR3 HCG27 MUC22 MDC1-AS1 FLOT1 GTF2H4 CCHCR1 DHX16 ATAT1 VARS2 HCG20 ABCF1 LINC00243 DDR1 MIR877 PSORS1C1 C6orf15 PPP1R10 NRM MRPS18B LOC105375014
nsv1074389 Chr.6:29116522 - 31446623 on Build GRCh38 Deletion SFTA2 OR12D3 CDSN DPCR1 HCG4B HCG17 TRIM26 GABBR1 PPP1R18 HLA-A OR5V1 TCF19 HLA-E MDC1 LOC554223 HCG22 UBD TRIM15 PRR3 MIR6891 MUC22 HLA-L TRIM39 MICA OR10C1 LINC01015 VARS2 SNORD32B HLA-B HLA-G OR2H1 HLA-H HCG4 TRIM31 LINC00243 DDR1 MIR877 PSORS1C1 MAS1L PPP1R11 PPP1R10 HLA-F-AS1 MRPS18B LOC105375014 GNL1 MIR4640 PSORS1C3 TUBB HCG8 POU5F1 HLA-F MOG IFITM4P PSORS1C2 HLA-K LOC101929006 HLA-C MUC21 TRIM10 OR2H2 TRIM40 C6orf136 IER3 TRIM39-RPP21 RNF39 HCG27 RPP21 MDC1-AS1 FLOT1 ZFP57 HLA-J HCG9 GTF2H4 CCHCR1 DHX16 OR14J1 ATAT1 OR2J2 HCG20 TRIM31-AS1 ZNRD1ASP ABCF1 ZNRD1 C6orf15 OR12D2 NRM HCG18 OR11A1
nsv524061 Chr.6:31139310 - 31166166 on Build GRCh38 Loss TCF19 POU5F1 PSORS1C1 CCHCR1 PSORS1C2
nsv601481 Chr.6:30454855 - 31316476 on Build GRCh38 Loss SFTA2 CDSN GNL1 MIR4640 PSORS1C3 TUBB DPCR1 POU5F1 PPP1R18 PSORS1C2 HLA-C MUC21 TCF19 HLA-E C6orf136 MDC1 HCG22 IER3 PRR3 HCG27 MUC22 MDC1-AS1 FLOT1 GTF2H4 CCHCR1 DHX16 ATAT1 VARS2 HCG20 ABCF1 LINC00243 DDR1 MIR877 PSORS1C1 C6orf15 PPP1R10 NRM MRPS18B LOC105375014
nsv1122126 Chr.6:28628023 - 31244023 on Build GRCh38 Deletion SFTA2 OR12D3 CDSN DPCR1 HCG4B HCG17 TRIM26 GABBR1 PPP1R18 HLA-A OR5V1 TCF19 HLA-E LINC01623 MDC1 LOC554223 HCG22 UBD TRIM15 PRR3 MUC22 HLA-L TRIM39 OR10C1 LINC01015 VARS2 SNORD32B OR2B3 HLA-G OR2H1 HLA-H ZNF311 HCG4 TRIM31 LINC00243 DDR1 MIR877 PSORS1C1 MAS1L PPP1R11 TRIM27 PPP1R10 HLA-F-AS1 MRPS18B LOC105375014 LINC00533 GNL1 MIR4640 PSORS1C3 TUBB HCG8 HCG16 POU5F1 HLA-F MOG IFITM4P PSORS1C2 HLA-K LOC101929006 MUC21 TRIM10 OR2H2 TRIM40 C6orf136 IER3 OR2J3 TRIM39-RPP21 RNF39 HCG27 RPP21 MDC1-AS1 FLOT1 ZFP57 HLA-J HCG9 GTF2H4 CCHCR1 DHX16 OR14J1 ATAT1 OR2W1 LOC100129636 OR2J2 HCG20 TRIM31-AS1 ZNRD1ASP ABCF1 HCG14 LINC01556 ZNRD1 C6orf15 OR12D2 NRM HCG18 OR11A1
nsv1144137 Chr.6:29720323 - 31338123 on Build GRCh38 Deletion SFTA2 CDSN DPCR1 HCG4B HCG17 TRIM26 PPP1R18 HLA-A TCF19 HLA-E MDC1 LOC554223 HCG22 TRIM15 PRR3 MUC22 HLA-L TRIM39 VARS2 HLA-G HLA-H HCG4 TRIM31 LINC00243 DDR1 MIR877 PSORS1C1 PPP1R11 PPP1R10 HLA-F-AS1 MRPS18B LOC105375014 GNL1 MIR4640 PSORS1C3 TUBB HCG8 POU5F1 HLA-F IFITM4P PSORS1C2 HLA-K HLA-C MUC21 TRIM10 TRIM40 C6orf136 IER3 TRIM39-RPP21 RNF39 HCG27 RPP21 MDC1-AS1 FLOT1 HLA-J HCG9 GTF2H4 CCHCR1 DHX16 ATAT1 HCG20 TRIM31-AS1 ZNRD1ASP ABCF1 ZNRD1 C6orf15 NRM HCG18
nsv970105 Chr.6:31163935 - 31166130 on Build GRCh38 Duplication TCF19 POU5F1
nsv601264 Chr.6:29883666 - 31320716 on Build GRCh38 Loss SFTA2 CDSN DPCR1 HCG4B HCG17 TRIM26 PPP1R18 HLA-A TCF19 HLA-E MDC1 HCG22 TRIM15 PRR3 MUC22 HLA-L TRIM39 VARS2 HLA-H TRIM31 LINC00243 DDR1 MIR877 PSORS1C1 PPP1R11 PPP1R10 MRPS18B LOC105375014 GNL1 MIR4640 PSORS1C3 TUBB HCG8 POU5F1 PSORS1C2 HLA-K HLA-C MUC21 TRIM10 TRIM40 C6orf136 IER3 TRIM39-RPP21 RNF39 HCG27 RPP21 MDC1-AS1 FLOT1 HLA-J HCG9 GTF2H4 CCHCR1 DHX16 ATAT1 HCG20 TRIM31-AS1 ZNRD1ASP ABCF1 ZNRD1 C6orf15 NRM HCG18
esv3411275 Chr.6:29981607 - 31490616 on Build GRCh38 Duplication SFTA2 HCP5 CDSN DPCR1 HCG17 TRIM26 PPP1R18 TCF19 HLA-E MDC1 HCG22 TRIM15 PRR3 MIR6891 MUC22 HLA-L TRIM39 MICA LOC102725068 VARS2 HLA-B TRIM31 LINC00243 DDR1 MIR877 PSORS1C1 PPP1R11 PPP1R10 MRPS18B LOC105375014 GNL1 MIR4640 PSORS1C3 TUBB HCG8 POU5F1 PSORS1C2 HLA-C MUC21 TRIM10 TRIM40 C6orf136 IER3 HCG26 TRIM39-RPP21 RNF39 HCG27 RPP21 MDC1-AS1 FLOT1 HLA-J GTF2H4 CCHCR1 DHX16 ATAT1 HCG20 TRIM31-AS1 ZNRD1ASP ABCF1 ZNRD1 C6orf15 NRM HCG18

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