Assay Details
Target Gene Details
Entrez Gene ID: | 85007 |
Gene Name: | 5-phosphohydroxy-L-lysine phospho-lyase |
Gene Aliases: |
AGXT2L2, PHLU |
Location: |
Chr.5:178208474-178232822 on Build GRCh38 |
Assay Gene Location: | Within Intron 12 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
PHYKPL | NM_001278346.1 | NP_001265275.1 | ||
NM_153373.3 | NP_699204.1 | |||
NR_103508.1 | ||||
NR_103509.1 | ||||
NR_103510.1 | ||||
XM_006714925.2 | XP_006714988.1 | |||
XM_011534669.2 | XP_011532971.1 | |||
XM_011534670.2 | XP_011532972.1 | |||
XM_011534671.2 | XP_011532973.1 | |||
XM_011534672.2 | XP_011532974.1 | |||
XM_011534674.2 | XP_011532976.1 | |||
XM_011534676.2 | XP_011532978.1 | |||
XM_017009996.1 | XP_016865485.1 | |||
XM_017009997.1 | XP_016865486.1 | |||
XM_017009998.1 | XP_016865487.1 | |||
XM_017009999.1 | XP_016865488.1 | |||
AF318375.1 | AAL55882.1 | |||
AK023470.1 | ||||
AK093737.1 | 7 | 1743 | ||
AK292061.1 | ||||
BC008009.1 | AAH08009.1 | |||
BC037567.1 | AAH37567.1 | |||
BC110335.1 | AAI10336.1 | |||
HY267487.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv1019404 | Chr.5:178080079 - 178432088 on Build GRCh38 | Gain | COL23A1 HNRNPAB PHYKPL RMND5B GMCL1P1 N4BP3 NHP2 |
More Information
Additional Information:
For this assay, SNP(s) [rs111975740] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |