Assay Details
Target Gene Details
Entrez Gene ID: | 152992 |
Gene Name: | tRNA methyltransferase 44 homolog (S. cerevisiae) |
Gene Aliases: |
C4orf23, METTL19, TRM44 |
Location: |
Chr.4:8440774-8512531 on Build GRCh38 |
Assay Gene Location: | Within Intron 9 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
TRMT44 | NM_152544.2 | NP_689757.2 | ||
XM_005247950.3 | XP_005248007.1 | |||
XM_011513406.2 | XP_011511708.1 | |||
XM_011513407.2 | XP_011511709.1 | |||
XM_011513408.1 | XP_011511710.1 | |||
XM_011513409.2 | XP_011511711.1 | |||
AK093044.1 | BAC04031.1 | |||
BC035655.1 | AAH35655.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv1002794 | Chr.4:8108356 - 8489207 on Build GRCh38 | Gain | ABLIM2 ACOX3 SH3TC1 TRMT44 HTRA3 |
nsv1005698 | Chr.4:8434559 - 10248775 on Build GRCh38 | Gain | MIR548I2 USP17L11 LOC101928532 USP17L30 USP17L10 DEFB131 LOC100133128 TRMT44 OR7E85P USP17L24 CPZ USP17L18 USP17L5 USP17L25 OR7E35P USP17L9P HMX1 USP17L27 USP17L12 USP17L6P ACOX3 MIR3138 FAM86KP USP17L22 USP17L26 GPR78 USP17L19 LOC650293 DRD5 USP17L21 USP17L28 USP17L15 USP17L29 USP17L20 USP17L13 SLC2A9 USP17L17 WDR1 |
nsv829854 | Chr.4:8401194 - 8504680 on Build GRCh38 | Gain+Loss | ACOX3 TRMT44 |
More Information
Additional Information:
For this assay, SNP(s) [rs73213414] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Intronic Non-exonic DGV Variation |