Assay Details
Target Gene Details
Entrez Gene ID: | 102724965 |
Gene Name: | collagen alpha-2(I) chain-like |
Gene Aliases: |
- |
Location: |
Chr.2:45648733-45652047 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 2 - Exon 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
LOC102724965 | XM_011533229.2 | XP_011531531.2 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
dgv3804n100 | Chr.2:45180603 - 45750333 on Build GRCh38 | Gain | LINC01121 SRBD1 PRKCE LOC102724965 |
esv2751894 | Chr.2:45141551 - 45772680 on Build GRCh38 | Gain | LINC01121 SRBD1 PRKCE LOC102724965 |
nsv1013787 | Chr.2:45541783 - 45738705 on Build GRCh38 | Gain | SRBD1 PRKCE LOC102724965 |
dgv1119e212 | Chr.2:45181796 - 45749281 on Build GRCh38 | Gain | LINC01121 SRBD1 PRKCE LOC102724965 |
nsv998852 | Chr.2:45419685 - 46135538 on Build GRCh38 | Gain | SRBD1 PRKCE LOC102724965 |
nsv581741 | Chr.2:45622938 - 45681498 on Build GRCh38 | Gain | PRKCE LOC102724965 |
More Information
Additional Information:
For this assay, SNP(s) [rs78025356] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic Non-exonic DGV Variation |