Assay Details
Target Gene Details
Entrez Gene ID: | 57657 |
Gene Name: | hyperpolarization activated cyclic nucleotide gated potassium channel 3 |
Gene Aliases: |
- |
Location: |
Chr.1:155277427-155289848 on Build GRCh38 |
Assay Gene Location: | Within Exon 2 |
Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
---|---|---|---|---|
HCN3 | NM_020897.2 | NP_065948.1 | ||
NR_073074.1 | ||||
XM_011509816.2 | 1 | 304 | XP_011508118.1 | |
XM_011509817.2 | XP_011508119.1 | |||
AB040968.2 | BAA96059.2 | |||
AF488550.1 | AAO49470.1 | |||
AK055840.1 | ||||
AK299333.1 | ||||
DA127524.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
Target Variation |
Location | CNV Subtype |
Genes |
---|---|---|---|
nsv831636 | Chr.1:155249432 - 155475073 on Build GRCh38 | Loss | FAM189B PKLR RUSC1-AS1 ASH1L SCAMP3 POU5F1P4 RUSC1 MIR555 HCN3 CLK2 LOC105371451 FDPS |
esv33869 | Chr.1:155253492 - 155948170 on Build GRCh38 | Loss | GON4L RUSC1-AS1 POU5F1P4 RUSC1 MIR555 LOC105371451 FDPS FAM189B ASH1L-AS1 SCARNA4 DAP3 ARHGEF2 HCN3 CLK2 RIT1 PKLR SNORA80E RXFP4 ASH1L SYT11 SCAMP3 SCARNA26A MSTO2P MSTO1 YY1AP1 SCARNA26B KIAA0907 LOC100505728 |
nsv436027 | Chr.1:155260761 - 155291532 on Build GRCh38 | Insertion | PKLR SCAMP3 HCN3 CLK2 |
esv23319 | Chr.1:155257268 - 155292883 on Build GRCh38 | Gain | PKLR SCAMP3 HCN3 CLK2 |
dgv3n68 | Chr.1:155122502 - 155343618 on Build GRCh38 | Loss | EFNA1 KRTCAP2 PKLR RUSC1-AS1 MUC1 ASH1L THBS3 SCAMP3 GBAP1 RUSC1 GBA LOC105371451 MTX1 FDPS FAM189B SLC50A1 TRIM46 MIR92B HCN3 DPM3 CLK2 |
More Information
Set Membership: |
Intragenic Exonic DGV Variation |